@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0233: (2016-04-20 )
MTRTRSGSLAAGGLNWASLPLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLALRLIEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPVAEIDVDYSPAQLEDTFADEDRRTLAAASA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLM_A_4(4XB9)
?
[Raw transfer]



MYR_A_2(3EE4)
RIR2H_MYCTU
[Raw transfer]



MYR_C_16(4AC8)
RIR2H_MYCTU
[Raw transfer]



MYR_A_7(4AC8)
RIR2H_MYCTU
[Raw transfer]



MYR_B_12(4AC8)
RIR2H_MYCTU
[Raw transfer]



PLM_B_10(4XBV)
?
[Raw transfer]



PLM_A_6(4XBV)
?
[Raw transfer]



PLM_A_4(5DCR)
?
[Raw transfer]



PLM_A_4(5DCS)
?
[Raw transfer]



PLM_A_5(4HR4)
?
[Raw transfer]



PLM_A_6(4HR0)
?
[Raw transfer]



PLM_A_4(5DCO)
?
[Raw transfer]



PLM_A_5(4XBW)
?
[Raw transfer]



PLM_A_2(4HR5)
?
[Raw transfer]



MYR_A_2(3EE4)
RIR2H_MYCTU
[Raw transfer]
21 PsiBlast_CBE 97.53100% -94 - C3 -4AC8 - RIR2H_MYCTU -
22 PsiBlast_CBE 97.01100% -93 - C3 -4AC8 5.9 RIR2H_MYCTU
2 PsiBlast_PDB 96.76100% -93 - C3 -4AC8 5.8 RIR2H_MYCTU
1 PsiBlast_PDB 96.04100%-100 - C3 -3EE4 5.9 RIR2H_MYCTU
23 PsiBlast_CBE 95.83100% -91 - C3 -4AC8 6.0 RIR2H_MYCTU
25 HHSearch 75.0884% -80 - C3 -3EE4 3.0 RIR2H_MYCTU
26 HHSearch 71.8935% -92 - C3 -4XB9 - ? -
46 Fugue 69.7334% -85 - C3 -4HR0 - ? -
5 PsiBlast_PDB 67.1142% -99 - C3 -4HR5 4.0 ?
6 PsiBlast_PDB 67.0742% -98 - C3 -4XB9 4.1 ?
9 PsiBlast_PDB 66.6542% -95 - C3 -5DCO 4.9 ?
3 PsiBlast_PDB 66.2542% -99 - C3 -4HR0 4.4 ?
4 PsiBlast_PDB 65.8042% -96 - C3 -4HR4 3.4 ?
11 PsiBlast_PDB 65.7142% -95 - C3 -5DCS 4.8 ?
10 PsiBlast_PDB 65.4642% -94 - C3 -5DCR 4.6 ?
7 PsiBlast_PDB 65.3242% -95 - C3 -4XBV 3.4 ?
24 PsiBlast_CBE 65.2042% -94 - C3 -4XBV 3.2 ?
8 PsiBlast_PDB 63.5942% -93 - C3 -4XBW 3.4 ?
40 HHSearch 50.4315% -73 - C3 -3MJO - ? -
32 HHSearch 49.9414% -70 - C3 -2RCC - RIR2_BACHD -