@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0418: (2016-04-22 )
MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAHLSKLQDIANANDGTRAVGTPGYQASVDYVVNTLRNSGFDVQTPEFSARVFKAEKGVVTLGGNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDYDRLPVSGAVVLVDRGVCPFAQKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSVTKSVGFQLRGQSGPTTVKLTASTQSFKARNVIAQTKTGSSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGNSPHVSNAVRFAFWGAEEFGLIGSRNYVESLDIDALKGIALYLNFDMLASPNPGYFTYDGDQSLPLDARGQPVVPEGSAGIERTFVAYLKMAGKTAQDTSFDGRSDYDGFTLAGIPSGGLFSGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDRTALGINGAGVAYAVGLYAQDLGGPNGVPVMADRTRHLIAKP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PHE_A_5(1F2P)
APX_STRGG
[Raw transfer]



TRP_A_5(1TF8)
APX_STRGG
[Raw transfer]



DPN_A_5(1TKH)
APX_STRGG
[Raw transfer]



PHE_A_5(1F2P)
APX_STRGG
[Raw transfer]



PHI_A_5(1TF9)
APX_STRGG
[Raw transfer]



DTR_A_5(1TKF)
APX_STRGG
[Raw transfer]



LEU_A_5(1F2O)
APX_STRGG
[Raw transfer]



MET_A_5(1QQ9)
APX_STRGG
[Raw transfer]



BES_A_8(2EK9)
?
[Raw transfer]



MED_A_5(1TKJ)
APX_STRGG
[Raw transfer]



MED_A_5(1TKJ)
APX_STRGG
[Raw transfer]
55 HHSearch 95.5830% -64 - C1 -2EK8 - ? -
11 PsiBlast_PDB 90.1829% -57 - C1 -2EK8 - ? -
12 PsiBlast_PDB 89.6229% -57 - C1 -2EK9 5.5 ?
57 HHSearch 86.0120% -63 - C1 -3KAS - TFR1_HUMAN -
58 HHSearch 85.6021% -54 - C1 -4TWE - NALDL_HUMAN -
59 HHSearch 83.8923% -56 - C1 -3IIB - ? -
56 HHSearch 82.1619% -61 - C1 -3FED - NALD2_HUMAN -
75 Fugue 79.8140% -45 - C1 -1F2P 3.7 APX_STRGG
62 HHSearch 76.2448% -53 * C1 *1TKJ 2.8 APX_STRGG
79 Fugue 76.0418% -49 - C1 -1DE4 - TFR1_HUMAN -
8 PsiBlast_PDB 75.2347% -49 - C1 -1TKH 5.1 APX_STRGG
3 PsiBlast_PDB 75.0747% -50 - C1 -1F2O 3.1 APX_STRGG
7 PsiBlast_PDB 74.6447% -49 - C1 -1TKF 4.6 APX_STRGG
9 PsiBlast_PDB 74.6247% -51 - C1 -1TKJ 2.8 APX_STRGG
2 PsiBlast_PDB 74.2647% -49 - C1 -1QQ9 1.7 APX_STRGG
10 PsiBlast_PDB 74.1947% -50 - C1 -1XBU - APX_STRGG -
1 PsiBlast_PDB 74.1347% -48 - C1 -1CP7 - APX_STRGG -
5 PsiBlast_PDB 74.0147% -53 - C1 -1TF8 6.6 APX_STRGG
4 PsiBlast_PDB 73.9247% -52 - C1 -1F2P 3.5 APX_STRGG
6 PsiBlast_PDB 73.6647% -50 - C1 -1TF9 4.1 APX_STRGG