@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1442: (2016-05-01 )
MQVYTSATHWGVFTARVHGGDIAAVAALASDTNPAPQLQNLPGAVRHRSRIANPAVRRGWLQHGPGPSSARGAEEFVEVSWDELIELLASELRRTVDRYGNEAIYGSSYGWASAGRFHHAQSQVHRFLNMLGGYTASRHSYSAGASEVIFPHIVGAALFEALAETTTWDVIVDHTALLVAFGGLPVKNTAVMPGGTTAHPDRDYVGRYRARGGRLVSVSPLRDDIAAIAGPLDDRCRWLAPVPGTDVAIMLGLAYVLATESLADRAFLGRYCTGYERFERYLLGLDDGIPKTPEWAAALSGLAAGDLRDLARRMAEHRTLITTSLSLQRIEHGEQTVWMAATLAAMLGQIGLPGGGFGHGYSSNGVGNPPLACGLPALPQGNNPVSTFIPVAAISELLQRPGQRLAYNGRLLELPDIKCVYWAGGNPFHHHQNLPRLRRALSRVDTIVVHEQYWTAMAKHADIVVPTTTSFERDDFAASKTNPTLIAMPAMVPPYANARDDYHTFSALAHRLGFGKQFTEGRSAREWLEHMYDKWSAELDFPVPSFAEFWRTGRLELPTRTGLTWLADFRADPAAHPLGTPSGRIEIFSDTVDAFALPDCAGHPTWYEPSEWLGGPRAARYPLHLIANQPRTRLHSQLDHGGASMASKIRGREPIRIHPDDAAARELTDGDIVRVFNDRGACLAGVVIDDGLRPKVVQLSTGAWFDPADPRDPDSMCVHGNPNALSNDSGTSSLAHGSTGQHVLVQIERFTGELPPVRAHEPPRLA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGD_A_2(3DMR)
DSTOR_RHOCA
[Raw transfer]



PGD_A_2(1DMS)
DSTOR_RHOCA
[Raw transfer]



PGD_A_2(1E18)
DSTOR_RHOCA
[Raw transfer]



PGD_A_2(4DMR)
DSTOR_RHOCA
[Raw transfer]



PGD_A_2(1DMR)
DSTOR_RHOCA
[Raw transfer]



PGD_A_2(2DMR)
DSTOR_RHOCA
[Raw transfer]



MM4_A_4(1DMS)
DSTOR_RHOCA
[Raw transfer]



O_A_6(3DMR)
DSTOR_RHOCA
[Raw transfer]



O_A_6(1DMR)
DSTOR_RHOCA
[Raw transfer]
1 PsiBlast_PDB 99.3340% -80 - C3 -1E18 10.8 DSTOR_RHOCA
9 PsiBlast_PDB 98.3040% -81 - C3 -4DMR 10.7 DSTOR_RHOCA
3 PsiBlast_PDB 98.2840% -82 - C3 -1E61 - DSTOR_RHOCA -
21 PsiBlast_CBE 98.2140% -81 - C3 -1E61 - DSTOR_RHOCA -
7 PsiBlast_PDB 98.1840% -81 - C3 -2DMR 9.9 DSTOR_RHOCA
24 PsiBlast_CBE 98.0440% -81 - C3 -1E5V - DSTOR_RHOCA -
6 PsiBlast_PDB 98.0240% -80 - C3 -1DMR 10.7 DSTOR_RHOCA
8 PsiBlast_PDB 97.9040% -79 - C3 -3DMR 10.5 DSTOR_RHOCA
10 PsiBlast_PDB 97.8239% -82 - C3 -1DMS 10.3 DSTOR_RHOCA
22 PsiBlast_CBE 97.7040% -78 - C3 -1E60 - DSTOR_RHOCA -
2 PsiBlast_PDB 97.6240% -79 - C3 -1E60 - DSTOR_RHOCA -
4 PsiBlast_PDB 97.5740% -83 - C3 -1E5V - DSTOR_RHOCA -
23 PsiBlast_CBE 97.3840% -78 - C3 -1H5N - DSTOR_RHOCA -
5 PsiBlast_PDB 97.3540% -79 - C3 -1H5N - DSTOR_RHOCA -
11 PsiBlast_PDB 95.3935% -79 - C3 -1TMO - TORA_SHEMA -
34 HHSearch 86.9233% -71 - C3 -1TMO - TORA_SHEMA -
35 HHSearch 73.2019% -58 - C3 -4YDD - ? -
37 HHSearch 72.9619% -55 - C3 -1Q16 - NARG_ECOLI -
58 Fugue 72.3721% -63 - C3 -2VPZ - ? -
31 HHSearch 71.6920% -60 - C3 -2E7Z - AHY_PELAE -