@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3038: (2016-02-13 )
MSMTPIARAVAFAALGSSITVPTLAHAEFIKDSKASIELRNFYFNRDFRQEGASQSKAEEWAQGFLLRYESGYTEGTIGFGVDAIGLLGVKLDSSPDRSGTGLLKRDRETGRAQDDYGEAGITAKLRASKSTLKIGTLTPKLPVIMPNDSRLLPQTFQGGALNSMEIDGLTLDAGRLKKVNQRDSSDNEDMTITGGGKRNIVVRSGLTSDKFDFAGGSYKWTDNLSTSYHYGKLDNFYKQHYLGLVHTLPIADKQSLKSDIRWARSTDDGSSNVDNKALNAMFTYSLGYHAFGVGYQKMSGDTGFAYINGADPYLVNFIQIGDFANKDEKSWQARYDYNFAGVGIPGLTFMTRYVKGDNIDLLTTSGEGKEWERDMDIAYVFQSGPLKNLGVKWRNATMRTNYTNDYDENRLIVSYTLPLW

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C8E_B_4(3SZD)
?
[Raw transfer]



C8E_A_13(2QTK)
?
[Raw transfer]



C8E_A_13(3T24)
?
[Raw transfer]



C8E_A_9(2Y0H)
?
[Raw transfer]



C8E_B_9(4FRX)
?
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]



C8E_B_3(2QTK)
?
[Raw transfer]



C8E_A_9(3SYS)
?
[Raw transfer]



C8E_A_9(2Y2X)
?
[Raw transfer]



C8E_A_6(4FSP)
?
[Raw transfer]



C8E_A_7(2ODJ)
PORD_PSEAE
[Raw transfer]



C8E_A_9(2Y2X)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]



C8E_A_2(3SY7)
PORD_PSEAE
[Raw transfer]



C8E_A_9(3SZV)
?
[Raw transfer]



C8E_A_9(2Y0K)
?
[Raw transfer]



C8E_B_9(4FMS)
?
[Raw transfer]



C8E_A_5(4FRX)
?
[Raw transfer]



C8E_A_8(2QTK)
?
[Raw transfer]



C8E_A_2(3SY7)
PORD_PSEAE
[Raw transfer]



C8E_A_5(4FT6)
?
[Raw transfer]



C8E_B_5(3SZD)
?
[Raw transfer]
1 PsiBlast_PDB 99.2799% -25 - C7 -3T24 - ? -
21 PsiBlast_CBE 97.9199% -29 - C7 -3T24 - ? -
22 PsiBlast_CBE 97.8799% -31 - C7 -3T24 - ? -
40 HHSearch 95.0593% -22 - C7 -3T24 3.0 ?
2 PsiBlast_PDB 87.0568% -18 - C7 -4FRT - ? -
4 PsiBlast_PDB 83.9859% -19 - C7 -3T20 - ? -
3 PsiBlast_PDB 83.8458% -18 - C7 -2Y0L - ? -
39 HHSearch 83.6459% -23 - C7 -2Y0L - ? -
8 PsiBlast_PDB 83.0351% -28 - C7 -3T0S - ? -
7 PsiBlast_PDB 83.0351% -28 - C7 -2Y0H - ? -
38 HHSearch 82.8752% -26 - C7 -2Y0H 2.9 ?
5 PsiBlast_PDB 82.0356% -26 - C7 -3SZV - ? -
6 PsiBlast_PDB 81.5056% -20 - C7 -2Y0K 2.5 ?
35 HHSearch 81.3155% -26 - C7 -3SZV 3.3 ?
9 PsiBlast_PDB 80.9051% -31 - C7 -4FSP 2.1 ?
23 PsiBlast_CBE 77.5644% -17 - C7 -4FRX 2.5 ?
11 PsiBlast_PDB 76.5044% -20 - C7 -4FRX 3.3 ?
17 PsiBlast_PDB 76.2241% -13 - C7 -3JTY - ? -
10 PsiBlast_PDB 75.5249% -15 - C7 -4FT6 2.3 ?
29 PsiBlast_CBE 75.3741% -17 - C7 -3JTY - ? -
37 HHSearch 74.9541% -13 - C7 -3SY7 2.1 PORD_PSEAE
14 PsiBlast_PDB 74.3841% -20 - C7 -3SYS 3.2 ?
33 HHSearch 73.9943% -22 - C7 -2Y2X 2.1 ?
16 PsiBlast_PDB 73.9441% -20 - C7 -2Y2X 2.1 ?
12 PsiBlast_PDB 72.8442% -22 - C7 -4FMS 1.9 ?
18 PsiBlast_PDB 72.4040% -21 - C7 -3SY7 2.1 PORD_PSEAE
28 PsiBlast_CBE 72.2041% -14 - C7 -2QTK 2.1 ?
15 PsiBlast_PDB 72.2041% -15 - C7 -2QTK 2.7 ?
25 PsiBlast_CBE 71.7642% -21 - C7 -3SZD 2.4 ?
13 PsiBlast_PDB 71.5042% -20 - C7 -3SZD 1.9 ?
24 PsiBlast_CBE 71.2942% -22 - C7 -4FMS 1.8 ?
19 PsiBlast_PDB 71.1340% -19 - C7 -2ODJ 2.1 PORD_PSEAE