@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3723: (2016-02-20 )
MSLLFEPLSLRQITLPNRIAVSPMCQYSAQEGLANDWHLVHLGSRAVGGAGLVIVEATAVLPEGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAHAGRKASTWRPWLGKHGSVPIGDGGWIPVAPSAIPFDPQHTTPEALSEAQIEALVQAFVRAAERSLAAGFKVAEVHAAHGYLLHQFLSPLSNQRRDQYGGCFENRIRLLLQVTAAVRKAWPQELPLFVRLSATDWVEDGWNPDETVELARHLKDLGVDLIDVSSGGTAANAEIPVGPGYQTEFAERVKKEAGIASGTVGMITEPVQAEHILRTGQADLILLARELLRDPYWPLHAADELRNEQMPWPPQYLRAAHRSTPPRKSLEMQ

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PHB_B_6(3HGR)
OPR1_SOLLC
[Raw transfer]



FMN_A_7(1Z41)
NAMA_BACSU
[Raw transfer]



PHB_A_4(3HGR)
OPR1_SOLLC
[Raw transfer]



FMN_A_3(3GR7)
NAMA_GEOKA
[Raw transfer]



NCA_A_6(3UPW)
?
[Raw transfer]



4CH_A_7(4DF2)
?
[Raw transfer]



MLA_A_9(3TJL)
?
[Raw transfer]



8PG_A_4(2G5W)
OPR3_ARATH
[Raw transfer]



GOL_A_4(4E2B)
?
[Raw transfer]



FMN_B_8(4RNX)
OYE1_SACPS
[Raw transfer]



FMN_A_3(4RNX)
OYE1_SACPS
[Raw transfer]



FMN_A_2(4DF2)
?
[Raw transfer]



8PG_B_6(2G5W)
OPR3_ARATH
[Raw transfer]



PEG_A_5(4JIC)
?
[Raw transfer]



FMN_A_2(4M5P)
?
[Raw transfer]



PEG_A_7(4E2B)
?
[Raw transfer]
22 PsiBlast_CBE 96.0656% -91 - C4 -3HGJ - ? -
1 PsiBlast_PDB 95.7356% -95 - C4 -3HF3 - ? -
25 PsiBlast_CBE 95.6356% -93 - C4 -3HF3 - ? -
21 PsiBlast_CBE 95.5856% -94 - C4 -3HGJ - ? -
23 PsiBlast_CBE 95.3356% -94 - C4 -3HGJ - ? -
26 PsiBlast_CBE 95.2556% -92 - C4 -3HF3 - ? -
2 PsiBlast_PDB 95.0956% -92 - C4 -3HGJ - ? -
90 HHSearch 95.0058% -90 - C4 -3HGJ - ? -
24 PsiBlast_CBE 94.5556% -93 - C4 -3HF3 - ? -
5 PsiBlast_PDB 93.6349%-102 - C4 -3GR7 - NAMA_GEOKA -
34 PsiBlast_CBE 93.4149%-103 - C4 -3GR7 - NAMA_GEOKA -
33 PsiBlast_CBE 92.9349% -99 - C4 -3GR8 - NAMA_GEOKA -
87 HHSearch 92.5751% -96 - C4 -3GR7 6.2 NAMA_GEOKA
6 PsiBlast_PDB 92.3249% -99 - C4 -3GR8 - NAMA_GEOKA -
4 PsiBlast_PDB 91.3048% -98 - C4 -3KRZ - ? -
3 PsiBlast_PDB 91.0948% -97 - C4 -3KRU - ? -
32 PsiBlast_CBE 90.9048% -97 - C4 -3KRU - ? -
8 PsiBlast_PDB 90.7647%-100 - C4 -1Z42 - NAMA_BACSU -
9 PsiBlast_PDB 90.7147% -99 - C4 -1Z44 - NAMA_BACSU -
29 PsiBlast_CBE 90.6348% -99 - C4 -3KRZ - ? -
88 HHSearch 90.3950% -93 - C4 -1Z41 9.0 NAMA_BACSU
69 PsiBlast_CBE 57.7931% -86 - C4 -2G5W 2.6 OPR3_ARATH
82 PsiBlast_CBE 57.7331% -83 - C4 -4E2B 3.1 ?
68 PsiBlast_CBE 56.7631% -89 - C4 -2G5W 2.8 OPR3_ARATH
57 PsiBlast_CBE 56.5031% -85 - C4 -3HGR 3.4 OPR1_SOLLC
58 PsiBlast_CBE 55.3331% -83 - C4 -3HGR 3.4 OPR1_SOLLC
43 PsiBlast_CBE 55.1133% -74 - C4 -4JIC 2.9 ?
48 PsiBlast_CBE 53.9334% -84 - C4 -3TJL 3.6 ?
56 PsiBlast_CBE 53.7234% -83 - C4 -4DF2 4.4 ?
47 PsiBlast_CBE 52.0534% -82 - C4 -3UPW 3.1 ?
49 PsiBlast_CBE 51.6133% -73 - C4 -4M5P 4.5 ?
83 PsiBlast_CBE 46.9145% -97 - C4 -4RNX 4.0 OYE1_SACPS
84 PsiBlast_CBE 46.5745% -95 - C4 -4RNX 3.9 OYE1_SACPS