@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5364: (2016-03-06 )
MSKVSALVVDDAPFIRDLMKKGLRDNFPGLHIEEAVNGRKAQQLLSRQNVDLILCDWEMPEMSGLELLTWCRAQENLKTTPFIMVTSRGDKENVVQAIQAGVSDYIGKPFSNDQLVAKIKKALSRSGKLEALAAHAPRREIASGMANDSLAALTGGRAEVIKPAASPAKPAPAPKPASAPQASARPAGSGNPLGQAQLRLPQSSMPCVIKAVSLKEAQLVVKRADPLPQVLESAVLDLEENSDVARLNGYLHAIAALEPKPDSDWLLLTLRFVDRDPQKLDYLSRLIARGSTQKHYVPGA

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

WO4_B_16(3RVS)
CHEY_ECOLI
[Raw transfer]




WO4_A_4(3RVS)
CHEY_ECOLI
[Raw transfer]




GOL_A_6(3F7N)
CHEY_ECOLI
[Raw transfer]




GOL_B_22(3RVJ)
CHEY_ECOLI
[Raw transfer]




GOL_A_15(3RVJ)
CHEY_ECOLI
[Raw transfer]




GOL_A_5(3OO0)
CHEY_ECOLI
[Raw transfer]




GOL_A_6(3MYY)
CHEY_ECOLI
[Raw transfer]




GOL_B_15(3MYY)
CHEY_ECOLI
[Raw transfer]




GOL_B_12(3OLY)
CHEY_ECOLI
[Raw transfer]




GOL_A_8(3FFX)
CHEY_ECOLI
[Raw transfer]




GOL_A_8(3OLW)
CHEY_ECOLI
[Raw transfer]




GOL_B_17(3OLW)
CHEY_ECOLI
[Raw transfer]




GOL_A_5(3OLX)
CHEY_ECOLI
[Raw transfer]




GOL_A_2(3C3M)
?
[Raw transfer]




24 PsiBlast_CBE 81.6838%-101 - C3 -3FFT - CHEY_ECOLI -
14 PsiBlast_PDB 81.1238%-108 - C3 -2PL9 - CHEY_SALTY -
23 PsiBlast_CBE 81.0638%-114 - C3 -3RVL - CHEY_ECOLI -
7 PsiBlast_PDB 80.9938%-106 - C3 -3RVS 2.7 CHEY_ECOLI
49 PsiBlast_CBE 80.6937%-105 - C3 -1FQW - CHEY_ECOLI -
42 PsiBlast_CBE 80.5837%-107 - C3 -3OLW 2.3 CHEY_ECOLI
50 PsiBlast_CBE 80.3237%-106 - C3 -1FQW - CHEY_ECOLI -
67 PsiBlast_CBE 80.2637%-104 - C3 -1MIH - CHEY_ECOLI -
75 PsiBlast_CBE 80.2137%-106 - C3 -3OLY - CHEY_ECOLI -
33 PsiBlast_CBE 80.1938%-106 - C3 -3OLX 2.5 CHEY_ECOLI
22 PsiBlast_CBE 79.9938%-106 - C3 -3RVR - CHEY_ECOLI -
74 PsiBlast_CBE 79.9837%-104 - C3 -3OLY 2.5 CHEY_ECOLI
41 PsiBlast_CBE 79.9337%-105 - C3 -3OLW 2.9 CHEY_ECOLI
59 PsiBlast_CBE 79.9037%-107 - C3 -1F4V - CHEY_ECOLI -
9 PsiBlast_PDB 79.8938%-104 - C3 -3FFT - CHEY_ECOLI -
11 PsiBlast_PDB 79.8237%-106 - C3 -3RVP - CHEY_ECOLI -
45 PsiBlast_CBE 79.8037%-101 - C3 -1KMI - CHEY_ECOLI -
30 PsiBlast_CBE 79.7638%-107 - C3 -2FMK - CHEY_SALTY -
35 PsiBlast_CBE 79.7337%-103 - C3 -3RVJ 1.1 CHEY_ECOLI
6 PsiBlast_PDB 79.6938%-104 - C3 -3RVR - CHEY_ECOLI -
21 PsiBlast_CBE 79.6138%-101 - C3 -3RVS 2.7 CHEY_ECOLI
80 PsiBlast_CBE 79.3737%-104 - C3 -3F7N 2.9 CHEY_ECOLI
68 PsiBlast_CBE 79.2437%-104 - C3 -3MYY 2.7 CHEY_ECOLI
69 PsiBlast_CBE 79.0837%-104 - C3 -3MYY 2.3 CHEY_ECOLI
40 PsiBlast_CBE 78.9137%-103 - C3 -3FFX 3.0 CHEY_ECOLI
34 PsiBlast_CBE 78.8737%-105 - C3 -3RVJ 2.6 CHEY_ECOLI
73 PsiBlast_CBE 78.1337%-100 - C3 -3OO0 2.3 CHEY_ECOLI
108 HHSearch 68.0530% -91 - C3 -3C3M 2.8 ?