@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : J2XSJ3_9PSED: (2019-01-30 )
MNLPDAWRRTFADAVIEQQTIGESRADVWRISPADSAALFVKCEQVMTWGELPGEVQRLRWLETLDLPAPRVLETTTEAEHNWLLMTAVPGRDLASSEQLSPLQIVTLTAQALRELHAVAIDSCPFDHCLDKKIPLAREHVRAGLIDEEDFDDARLGRSAEDVFQQLLAERPPHEELVVTHGDACLPNLLAEHGRFSGFVDCGRLGVADRYQDLALAAHSITDNLGEQWLPAFFEAYGVQPDQRRIAFYQLLDEFF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_B_10(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




KAN_A_9(1ND4)
KKA2_KLEPN
[Raw transfer]




70 SP3 99.0348%-112 * C6 *1ND4 4.1 KKA2_KLEPN
21 Blastp_CBE 98.8449%-112 - C6 -1ND4 4.5 KKA2_KLEPN
1 PsiBlast_PDB 98.3548%-113 - C6 -1ND4 4.1 KKA2_KLEPN
38 HHSearch 94.0050%-111 - C6 -1ND4 4.1 KKA2_KLEPN
37 HHSearch 79.9536% -36 - C- -4H05 - ? -
36 HHSearch 77.3236% -39 - C- -4H05 - ? -
32 HHSearch 76.6132% -29 - C6 -4GKI - ? -
33 HHSearch 74.7732% -26 - C6 -4GKH - ? -
9 PsiBlast_PDB 72.5132% -25 - C6 -4EJ7 - ? -
24 Blastp_CBE 72.0133% -21 - C6 -4FEV - ? -
5 PsiBlast_PDB 71.9932% -29 - C6 -4FEU - ? -
34 HHSearch 71.7730% 15 - C6 -3TM0 - KKA3_ENTFL -
2 PsiBlast_PDB 71.4037% -28 - C- -4H05 - ? -
26 Blastp_CBE 71.3433% -22 - C6 -4FEV - ? -
22 Blastp_CBE 71.0833% -23 - C6 -4FEX - ? -
25 Blastp_CBE 70.8733% -28 - C6 -4FEV - ? -
7 PsiBlast_PDB 70.4132% -23 - C6 -4GKH - ? -
8 PsiBlast_PDB 70.3932% -27 - C6 -4GKI - ? -
35 HHSearch 70.3030% 19 - C6 -1L8T - KKA3_ENTFL -
4 PsiBlast_PDB 70.3032% -22 - C6 -4FEX - ? -