@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : N8ZRE3_9GAMM: (2019-01-31 )
MINDMKISLPQSLKSFIGNQPLQKDKVGQSPSDVYSFTKNNEKYYLKTTELIYAQTTYSIIREAKILDWLDGKLNVPELVLMDTDHENEYMISKAVPAKPLQDFTGKSDQFFIDIYTDALAQLQSISIKNCPFISNKKFRLAEAEFFIENGLLDELDDDEKDLKLWSSYQNFAEFLDDLKQQNFQEEYVFSHGDLTDSNVFLSHDAQIYFLDVGRAGIADRFVDIAFIERSLREDCSEDAALQFLNHLAEDDSFKRNYFLKLDELN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(3TM0)
KKA3_ENTFL
[Raw transfer]




ANP_B_8(1J7U)
KKA3_ENTFL
[Raw transfer]




ANP_A_7(1J7U)
KKA3_ENTFL
[Raw transfer]




ADP_A_4(1L8T)
KKA3_ENTFL
[Raw transfer]




ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




ADP_B_8(1J7L)
KKA3_ENTFL
[Raw transfer]




ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




ADP_A_5(2BKK)
KKA3_ENTFL
[Raw transfer]




ADP_C_8(2BKK)
KKA3_ENTFL
[Raw transfer]




NMY_A_2(2B0Q)
KKA3_ENTFL
[Raw transfer]




KAN_A_5(1L8T)
KKA3_ENTFL
[Raw transfer]




KAN_A_5(1L8T)
KKA3_ENTFL
[Raw transfer]




B31_A_3(3TM0)
KKA3_ENTFL
[Raw transfer]




B31_A_3(3TM0)
KKA3_ENTFL
[Raw transfer]




7 PsiBlast_PDB 81.9535% 9 - C4 -3TM0 6.9 KKA3_ENTFL
21 Blastp_CBE 81.3235% 13 - C4 -3Q2J - KKA3_ENTFL -
22 Blastp_CBE 81.1435% 12 - C4 -1J7U 6.7 KKA3_ENTFL
23 Blastp_CBE 80.7435% 12 - C4 -1J7L 6.9 KKA3_ENTFL
3 PsiBlast_PDB 80.5435% 10 - C4 -1J7U 7.3 KKA3_ENTFL
2 PsiBlast_PDB 80.0935% 6 - C4 -1J7L 6.5 KKA3_ENTFL
5 PsiBlast_PDB 79.1435% 11 - C4 -1L8T 7.1 KKA3_ENTFL
4 PsiBlast_PDB 79.0535% 12 - C4 -3Q2J - KKA3_ENTFL -
1 PsiBlast_PDB 78.9135% 7 - C4 -1J7I - KKA3_ENTFL -
6 PsiBlast_PDB 77.8635% 9 - C4 -2B0Q 3.8 KKA3_ENTFL
24 Blastp_CBE 77.3335% 18 - C4 -2BKK 6.4 KKA3_ENTFL
63 Fugue 76.2633% 15 - C4 -1J7L 5.5 KKA3_ENTFL
54 SP3 75.6533% 8 - C4 -1J7L 5.5 KKA3_ENTFL
81 HHSearch 72.5633% 43 - C4 -3TM0 2.9 KKA3_ENTFL
8 PsiBlast_PDB 71.1034% 19 - C4 -2BKK 5.1 KKA3_ENTFL
82 HHSearch 69.6233% 43 - C4 -1L8T 4.3 KKA3_ENTFL
80 HHSearch 67.3626% 26 - C4 -4GKI - ? -
79 HHSearch 64.5426% 26 * C4 *4GKH - ? -
17 PsiBlast_PDB 64.4627% 4 - C4 -1ND4 - KKA2_KLEPN -
55 SP3 64.0022% 27 - C4 -1ND4 - KKA2_KLEPN -