@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_103360T0_: (2019-03-28 )
SNDKCFVSSYKFTPDGRKVIEASQAAPGDGPITFTSTRDNFHMTIQIDANCAPRNPDDIQKELP
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------....-----....------.10-......-..20...--.-..----..30--....-...---.---40..--------.......50.-..----..--....60..--.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------SND
K
-----
C
F
V
S
------
S
Y
K-FTPDG
R
-
K
V
I
EASQ--A-AP----GDG
P
--
I
T
F
T
-STR---D---
N
-
F
H
--------
M
T
I
Q
I
DAN-C-AP----R
N
--
P
D
D
I
Q
KEL--P
30
Fugue
67.53
18%
-101
- C8 -
0.33
5LLJ
-
POL_VILVK
A:
[2-58]
---------------------------------------------------------------------------------------------------------------------------------------------------------
K
I
R
F
-----
C
Y
Y
R
------
T
R
K
-
R
G
H
P
G
E
-
W
Q
G
P
T
Q
V
--
L
-
W
G
----
G
D
G
A
--
I
V
V
K
-
D
R
G
---
T
---
D
-
R
Y
--------
L
V
I
A
-----------------
N
K
D
V
K
F
I
P
--
P
50
SP3
64.67
17%
-67
- C8 -
0.43
1H9R
-
MODE_ECOLI
A:
[78-139]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
D
N
-----
Q
L
P
G
------
I
I
S
-
H
I
E
R
G
A
-
E
Q
C
E
V
L
M
--
A
-
L
P
----
D
G
Q
T
--
L
C
A
T
-
V
P
V
---
N
---
E
-
A
---------
T
S
L
Q
Q
G
Q
N
V
T
-
A
Y
----
F
N
--
A
D
S
V
I
I
A
T
--
L
41
Fugue
59.74
20%
68
- C8 -
0.44
1RWU
-
YBED_ECOLI
A:
[1-87]
---------------------------------------------------------------------------------------------------------------------------------------------MKTKLNELLEFP
T
P
F
T
-----
Y
K
V
M
------
G
Q
A
-
L
P
E
L
V
D
-
Q
V
V
E
V
V
Q
--
R
H
A
P
----
G
D
Y
T
--
P
T
V
K
-
P
S
S
---
K
---
G
-
N
Y
--------
H
S
V
S
I
T
I
N
-
A
T
H
I
----
E
Q
--
V
E
T
L
Y
E
E
L
--
G
51
SP3
58.74
14%
-6
- C8 -
0.33
1E2W
-
CYF_CHLRE
A:
[169-232]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
------
I
Y
N
-
A
S
A
A
G
--
K
I
V
A
I
T
A
--
L
-
S
E
----
K
K
G
G
FE
V
S
I
E
--
K
A
---
N
---
G
-
E
V
--------
V
V
D
K
I
P
A
----
G
P
DLIV
K
E
--
G
Q
T
V
Q
A
D
Q
--
P
35
Fugue
56.56
21%
72
* C9 *
-
2E3P
1
C43BP_HUMAN
A:
[21-255]
---THRFVQKVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAP
L
N
N
R
-----
C
V
R
A
------
K
I
N
-
V
A
M
I
C
Q
-
T
L
V
S
P
P
------
E
----
G
N
Q
E
--
I
S
-----
R
---
D
---
N
-
I
L
--------
C
K
I
T
Y
V
A
N
-
V
-
N
P
----
G
G
WA
P
A
S
V
L
R
A
V
--
A
28
Fugue
56.37
20%
45
- C9 -
-
2E3N
1
A:
[22-255]
----HRFVQKVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAP
L
N
N
R
-----
C
V
R
A
------
K
I
N
-
V
A
M
I
C
Q
-
T
L
V
S
G
N
Q
-------------------
E
-
I
S
R
---
D
---
N
-
I
L
--------
C
K
I
T
Y
V
A
N
-
V
-
N
P
----
G
G
WA
P
A
S
V
L
R
A
V
--
A
47
SP3
55.83
17%
-4
- C8 -
0.21
1CVR
-
CPG2_PORGI
A:
[351-432]
-------------------------------------------------------------------------------------------------------------------------------------------PTEMQVTAPANISA
S
A
Q
T
-----
F
E
V
A
CDYNGA
I
A
T
-
L
S
D
D
G
----
D
M
V
G
T
--
A
-
I
V
----
K
D
G
K
--
A
I
I
K
-
L
N
E
SIA
D
---
E
-
T
N
--------
L
T
L
T
V
V
G
Y
-
N
-
K
V
----
T
V
--
I
K
D
V
K
V
E
----
43
SP3
54.44
17%
123
- C8 -
0.37
1BF4
-
DN7D_SULAC
A:
[1-63]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
------
T
V
K
-
F
K
Y
K
G
E
E
K
E
V
D
I
S
K
IK
K
-
V
W
----
R
V
G
K
M-
I
S
F
T
-
Y
D
E
---
G
---
G
G
K
T
--------
G
R
G
A
V
S
E
K
-
D
-
A
P
----
K
E
--
L
L
Q
M
L
E
K
Q
--
K
40
Fugue
53.25
17%
52
- C8 -
0.14
2HQL
-
Y554_MYCPN
A:
[1-104]
-------------------------------------------------------------------------------------------------------------------------MLNRVFLEGEIESSCWSVKKTGFLVTIKQMRF
F
G
E
R
-----
L
F
T
D
------
Y
Y
V
-
I
Y
A
N
G
Q
-
L
A
Y
E
L
E
K
--
H
-
T
K
----
K
Y
K
T
--
I
S
I
E
-
G
I
L
---
R
---
T
-
Y
L
ERKSEIWK
T
T
I
E
I
V
K
I
-
F
-
N
P
----
K
N
--
E
I
V
I
D
Y
K
E
--
I
34
Fugue
53.19
22%
-19
- C8 -
0.07
2KJI
-
A:
[1-50]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
E
-
T
R
A
C
G
R
-
K
L
I
S
L
V
M
--
A
-
V
C
----
G
D
L
C
--
N
P
Q
E
-
G
K
D
----------------------
I
A
T
E
C
-
C
-
G
N
----
Q
C
--
S
D
D
Y
I
R
S
A
CC
P
15
HHSearch
53.11
21%
51
- C9 -
-
3OBL
1
?
A:
[37-86]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
-
S
G
D
D
-
G
-
Q
T
L
N
G
T
M
--
T
-
Y
A
----
G
E
G
P
--
I
G
F
R
-
A
T
L
---
L
GNN
S
-
Y
E
--------
V
E
N
Q
W
G
G
D
-
S
-
A
P
----
W
H
--
S
G
---------
52
SP3
52.34
12%
76
* C8 *
0.43
1E0B
1
SWI6_SCHPO
A:
[2-62]
------------------------------------------------------------------------------------------------------------------------------------------------------QVE
N
Y
D
S
WEDLV
S
S
I
D
------
T
I
E
-
R
K
D
D
G
T
-
L
E
I
Y
L
T
W
--
K
--------
N
G
A
--
I
S
H
H
-
P
S
----------------------
T
I
T
N
K
K
-
C
--
P
----
Q
K
--
M
L
Q
F
Y
E
S
H
--
L
42
Fugue
51.78
13%
131
- C8 -
0.17
2A6M
-
?
A:
[4-133]
------------------------------------------------------------------------------------------------------------------------------------AVLYKSNHNVVYSCKYHIVWC
P
K
Y
R
-----
R
K
V
L
------
V
G
A
-
V
E
M
R
L
K
-
E
I
I
Q
E
V
A
--
K
-
E
L
----
R
V
E
I
--
I
E
M
Q
-
T
D
K
---
D
---
H
-
I
H
--------
I
L
A
D
I
D
P
S
---------
F
G
--
V
M
K
F
I
K
T
A
--
K
44
SP3
50.51
9%
19
- C8 -
0.32
1QHO
-
AMYM_GEOSE
A:
[496-576]
------------------------------------------------------------------------------------------------------------------------------------------ASAPQIGSVAPNMGI
P
G
N
V
-----
V
T
I
D
------
G
K
G
-
F
G
T
T
Q
G
-
T
V
T
F
G
G
V
--
T
-
A
T
VKSW
T
S
N
R
--
I
E
V
Y
V
P
N
M
---
A
---
A
-
G
L
--------
T
D
V
K
V
T
A
G
-
G
-
V
S
----
S
N
--
L
Y
S
Y
N
I
-----
33
Fugue
49.31
23%
29
- C7 -
-
5E24
-
HLES_DROME
B:
[1-38]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
------
R
L
Q
-
F
F
K
D
G
K
-
F
I
L
E
L
A
R
--
S
-
K
D
----
G
D
K
S
--
G
W
V
S
-
V
T
R
---
K
---
T
-
F
R
--------
P
P
------------------------------
49
SP3
48.11
18%
102
- C8 -
1B7T
-
MYS_ARGIR
A:
[29-131]
--------------------------------------------------------------------------------------------------------------------------------------------------------D
G
K
K
N
-----
C
W
V
P
-----------
D
E
K
E
G
-
F
A
S
A
E
I
Q
--
S
-
S
K
----
G
-
D
E
--
I
T
V
K
-
I
V
A
---
D
---
S
-
S
T
--------
R
T
V
K
-----------------
K
D
D
I
Q
S
-----
46
SP3
48.09
14%
102
- C8 -
0.37
1E8O
-
SRP09_HUMAN
A:
[1-74]
-----------------------------------------------------------------------------------------------------------------------------------------------------PQYQ
T
W
E
E
-----
F
S
R
A
------
A
E
K
L
Y
L
A
D
P
M
-
K
A
R
V
V
L
K
--
Y
-
R
H
----
S
D
G
N
--
L
C
V
K
-
V
T
D
---
D
---
L
-
V
C
--------
L
V
Y
K
T
D
Q
A
-
Q
-
D
V
----
K
K
--
I
E
K
F
H
S
Q
L
--
M
45
SP3
47.96
18%
44
- C8 -
0.22
1CKM
-
MCE_PBCV1
A:
[239-327]
-----------------------------------------------------------------------------------------------------------------------------------------------THHTIDFIIM
S
E
D
G
--------
T
------
I
G
I
-
F
D
P
N
L
R
-
K
N
V
P
V
G
K
LD
G
-
Y
Y
----
N
K
G
S
--
I
V
E
C
-
G
F
A
---
D
---
G
-
T
W
--------
K
Y
I
Q
G
R
S
D
-
K
-
N
Q
----
A
N
--
D
R
L
T
Y
E
K
T
--
L
32
Fugue
44.71
18%
52
- C6 -
-
4Z3C
-
C:
[7-50]
---------------------------------------------------------------------------------------------------------------------------------------------------------
K
R
K
R
-----
C
--------------------
G
T
C
E
P
C
R
--
R
-
L
E
----
N
C
G
A
--
C
T
S
C
-
T
N
R
---
R
---
T
----------------
H
Q
I
-
C
-
K
L
----
R
K
--
C
E
V
L
K
K
K
V
---
29
Fugue
43.64
12%
37
- C8 -
0.21
1R7M
-
SCE1_YEAST
A:
[3-225]
NIKKNQVMNLGPNSKLLKEYKSQLIELNIEQFEAGIGLILGDAYIRSRDEGKTYCMQFEWKNKAYMDHVCLLYDQWVLSPPHKKERVNHLGNLVITWGAQTFKHQAFNKLANLFIVNNKKTIPNNLVENYLTPMSLAYWFMDDGGKWDYNKNS
T
N
K
S
-----
I
V
L
N
------
T
Q
S
-
F
T
F
E
E
V
-
E
Y
L
V
K
G
L
--
R
-
N
K
----
F
Q
----
L
N
C
Y
-
V
K
I
---
N
---
K
-
N
K
--------
P
I
I
Y
I
D
S
M
-
S
-
Y
L
----
I
F
--
Y
N
L
I
K
P
Y
L
--
I