@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_103440T0_kcl100: (2019-03-28 )
AQKICHFTILKMYKNTWTFVRKDSAPADQTTTIEGIKVFFSKDCIPQHDY
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...--.---...-----.--.10...---.--.-...-20..-..----------...-------.30---..--......40........50
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQK--
I
---
C
H
F
-----
T
--
I
L
K
M
YK---N--
T
-
W
T
F
-
V
RKD-SA----------PAD-------QT
T
---
T
I
--
E
G
I
K
V
F
FSKDCIPQHDY
26
SP3
63.31
24%
77
- C6 -
0.09
1NVP
-
?
C:
[30-76]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D
T
E
N
VV
V
---
C
Q
Y
-----
D
--
K
I
H
R
S
K
---
N
--
K
-
W
K
F
-
H
L
K
D
-
G
----------------------
I
M
---
N
L
--
N
G
R
D
Y
I
F
S
K
-
A
I
G
D
A
E
W
39
Fugue
62.99
14%
0
- C- -
-
1YWH
2
UPAR_HUMAN
A:
[1-279]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRCMQCKTNGDCRVEECAL
G
Q
D
--
L
---
C
R
T
-----
T
--
I
V
R
L
W
E
---
E
GE
E
-
L
E
L
-
V
E
K
S
-
C
T
----------
H
S
E
-------
K
T
N
---
R
T
--
L
S
Y
R
T
G
L
K
I
T
S
L
T
E
V
V
C
33
SP3
62.72
16%
0
- C- -
-
1JJ2
-
RL24E_HALMA
T:
[4-56]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
--
E
---
C
D
Y
-----
C
--
G
T
D
I
E
P
---
G
--
T
G
T
M
F
-
V
H
K
D
-
G
---------------------
A
T
T
---
H
F
CS
S
K
C
E
N
N
A
D
L
G
R
E
A
R
N
L
E
1
PsiBlast_PDB
61.52
27%
-190
- C5 -
-
3EHT
1
CRFR1_HUMAN (first)
A:
[90-125]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
L
Y
P
---
E
--
T
-
W
D
A
-
V
R
Y
N
-
G
K
----------
L
I
A
-------
Y
P
I
---
A
V
--
E
A
L
S
L
I
Y
N
K
D
L
L
P
----
35
SP3
60.00
24%
53
* C8 *
-
1YUA
-
?
?:
[1-65]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNGEVAPP
K
E
D
--
P
---
V
P
L
-----
P
--
E
L
P
C
E
K
---
S
--
D
-
A
Y
F
-
V
L
R
D
-
G
A
AGVFLAANTF
P
K
S
-------
R
E
T
RAP
L
V
--
E
E
L
Y
R
F
--
R
D
R
L
P
----
2
PsiBlast_PDB
59.08
27%
-220
- C5 -
-
3JYR
1
MALE_SALTY
A:
[114-149]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
L
Y
P
---
F
--
T
-
W
D
A
-
V
R
Y
N
-
G
K
----------
L
I
A
-------
Y
P
I
---
A
V
--
E
A
L
S
L
I
Y
N
K
D
L
V
P
----
38
Fugue
55.83
13%
-67
- C6 -
0.35
5WTQ
-
PSMG4_HUMAN
A:
[13-126]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDVSLHNFSARL
W
E
Q
--
L
---
V
H
F
-----
H
--
V
M
R
L
T
D
---
S
--
L
-
F
L
W
-
V
G
A
T
-
P
H
----------
L
R
N
-------
L
A
V
---
A
M
--
S
S
-----
R
Y
D
S
I
P
V
S
T
S
36
Fugue
54.82
20%
-24
- C6 -
0.22
1YTF
-
TOA1_YEAST
C:
[34-79]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E
N
L
M
--
L
---
C
L
Y
-----
D
--
K
V
T
R
T
K
---
A
--
R
-
W
K
C
-
S
L
K
D
-----------------------
G
V
V
---
T
I
--
N
R
N
D
Y
T
F
Q
K
A
Q
V
E
A
E
W
V
28
SP3
53.09
18%
-31
- C6 -
0.22
1YTF
-
TOA1_YEAST
C:
[34-79]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E
N
L
M
--
L
---
C
L
Y
-----
D
--
K
V
T
R
T
K
---
A
--
R
-
W
K
C
-
S
L
K
D
-
G
----------------------
V
V
---
T
I
--
N
R
N
D
Y
T
F
Q
K
-
A
Q
V
E
A
E
W
27
SP3
53.09
18%
-31
- C6 -
0.22
1YTF
-
TOA1_YEAST
C:
[34-79]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E
N
L
M
--
L
---
C
L
Y
-----
D
--
K
V
T
R
T
K
---
A
--
R
-
W
K
C
-
S
L
K
D
-
G
----------------------
V
V
---
T
I
--
N
R
N
D
Y
T
F
Q
K
-
A
Q
V
E
A
E
W
48
Fugue
52.69
22%
-49
- C7 -
-
5JSD
13
?
A:
[172-719]
QTQYYLKYFNPEIVYPKNARIMLDNGDIVRSTVVNNTSNPNVDMTGWVKVSSVSQIFDETYNITQSVINGNLITVDNFGAKGDGVTDDSAAFQAYCDSALTGQNLYLGAKGRYILKNQVDLKGKGLVGNGCGKVSEFYYNLGCIDVDGSSPDLQGKTAFINCGPTIQNLTARCSNGAGKQVSFIEIDGYLANIDHITLINFYNQIVVKQALVGFNFTNAWLYYSQNAGIYCEDPLNRVSTTGTFHNIYFQLGDGHAMIFDRDVHGCDFDNIIFESMNGGIKARTVAHCGFGKFWCENLKTATSKDWLEVTGANSCYGNSFTGYVKLLGGWTSKTSPTLDSLPTNNYGGVSVSAEGISIVNAGNKAKMLMLPSGFKTGNATIDETHISSSTVTPLVKRRVIGADSSGAQYLASDTYTKLSRKWGTYNHGSNNAGAFYAPMMLTYDQSFSTPQNNNGWKIVKESTGVYRVERVSGNTSVITNGHIVVGSPLMGSRLGTG
T
G
A
--
T
---
H
G
I
-----
Q
--
M
I
E
T
Y
A
---
G
--
S
-
W
T
S
-
Y
----------------------------
T
---
E
A
--
A
G
F
K
V
F
W
R
D
S
S
N
A
L
V
D
P
12
HHSearch
49.78
41%
-40
- C5 -
-
2MYV
-
?
A:
[42-63]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
----------
N
R
N
-------
E
E
I
---
T
I
--
E
E
Y
K
V
F
V
N
E
A
C
H
P
----
6
HHSearch
49.27
41%
-67
- C5 -
-
5ZNG
-
?
C:
[22-43]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
----------
N
R
N
-------
E
E
I
---
T
I
--
E
E
Y
K
V
F
V
N
E
A
C
H
P
----
44
Fugue
49.12
14%
-98
- C9 -
-
5TJ5
-
VA0E_YEAST
L:
[1-57]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Y
T
V
V
--
G
---
V
F
I
-----
V
--
V
S
A
M
S
V
---
L
--
F
-
W
I
M
-
A
P
K
N
-
N
Q
----------
A
V
W
-------
R
S
T
---
V
I
--
L
T
L
A
M
M
F
L
M
W
A
I
T
F
L
C
Q
37
Fugue
48.81
21%
-4
- C3 -
-
3R0N
-
NECT2_HUMAN
A:
[1-128]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQDVRVQVLPEVRGQLGG
T
V
E
--
L
P--
C
H
L
-----
L
PP
V
P
G
L
Y
I
---
S
--
L
-
V
T
W
-
Q
R
P
D
-
A
P
----------
A
N
H
-------
Q
N
V
---
A
A
--
F
H
P
K
M
G
P
S
---
F
P
S
P
K
P
34
SP3
48.62
16%
103
- C9 -
-
1H8A
-
MYB_AVIMB
C:
[79-126]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
T
S
--
W
TEE
E
D
R
-----
I
--
I
Y
Q
A
H
K
RLG
N
--
R
-
W
A
E
-
I
A
K
L
-
L
-----------
P
G
----------
R
---
T
D
--
N
A
V
K
N
H
W
N
S
T
M
R
R
----
30
SP3
48.21
12%
-20
* C9 *
-
1TF0
1
B:
[1-53]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
--
I
---
D
Q
W
-----
L
--
L
K
N
A
K
E
---
D
--
A
-
I
A
E
-
L
K
K
A
-
G
I
----------
T
S
D
FYFNAIN
K
A
K
---
T
V
--
E
E
V
N
A
L
K
N
-
E
I
L
K
A
H
A
-
51
Fugue
47.36
16%
-23
* C6 *
0.34
4GA6
1
AMPPA_THEKO
A:
[1-493]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKAKIRILDMFSGRYTVLINEEDAKEAK
L
H
P
--
D
---
D
L
V
-----
K
--
I
E
A
G
K
K
---
A
--
V
-
Y
G
S
-
V
A
L
S
-
N
---------------------------
L
V
--
G
K
G
E
V
G
I
S
R
D
V
L
D
L
H
N
F
29
SP3
45.46
16%
-9
- C6 -
0.28
1YTF
-
T2AG_YEAST
D:
[54-118]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NT
Q
S
K
--
L
---
T
V
K
-----
G
--
N
L
D
T
Y
G
FCD
D
--
V
-
W
T
F
-
I
V
K
N
C
Q
V
----------
T
V
E
-------
S
V
I
---
S
V
--
D
K
L
R
I
V
---
A
C
N
S
K
---
45
Fugue
44.83
20%
69
* C7 *
-
4R6Y
1
PHNS_SALTY
A:
[1-317]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SMESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFNTDTASAIPDANNLYSPLVKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDAGFAYLGKLQANNVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSEN
G
K
K
--
L
---
I
N
F
LLSKE
A
--
Q
T
R
V
S
E
---
L
--
S
-
W
G
M
P
V
R
S
D
-
V
T
----------
P
S
D
-------
E
H
Y
---
K
A
--
A
T
A
A
L
E
G
V
Q
S
W
Q
P
N
W
D
D