@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_104650T0_kcl91: (2019-03-28 )
DCFIGLYEKGGRNPNHIAGTEADESGTFEVLHENYKIRVKIFKCVKQHVYDSTPSGTEIRVI
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..----.......10--------.....----..--------------.20-.----..-..-------.--...30.-----..--.....--40.--------...----.----....-----------50---......------.----..60.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D
C
----
F
I
G
L
YEKGG--------RNPNH----IA--------------GT--E----AD-ES-------G--
T
F
E
V
LH-----EN--
Y
K
I
R
V
--
K
-
I
--------
F
K
C
----
V
----
K
Q
H
V-----------Y----DSTPSG------
T
----
E
I
R
VI
26
Fugue
85.61
25%
-126
* C4 *
-
2PK8
-
?
A:
[10-103]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STRGDLIRILGEIEEKMNELKMDGFNP
D
-----
I
I
L
F
G
R
E
A
Y
--------
N
F
L
S
N
----
L
L
--------------
K
K
--
E
----
M
E
-
E
E
-------
G
--
P
F
T
H
V
S
------
N
--
I
K
I
E
I
--
L
-
E
--------
E
L
G
----
G
----
D
A
V
V
-----------
I
----
D
S
K
V
L
G
LVPGAA
K
----
R
I
K
I
I
36
SP3
74.04
25%
37
- C3 -
0.44
1KAF
-
MOTA_BPT4
A:
[104-211]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEITSDMEEDK
D
L
----
M
L
K
L
L
D
K
N
G
FVLKKVEI
Y
R
S
N
Y
----
L
A
--------------
I
L
--
E
----
K
R
-
T
N
-------
G
IR
N
F
E
I
-
N
-----
N
N
--
G
N
M
R
I
--
F
-
G
--------
Y
K
M
----
M
----
E
H
H
I
-----------
Q
----
K
F
T
D
I
G
------
M
----
S
C
K
I
A
22
Fugue
70.98
17%
45
* C3 *
0.26
2M4L
-
?
A:
[1-99]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEDWTELNS
N
N
----
I
I
G
Y
W
S
T
G
I
--------
E
G
T
H
K
----
L
L
--------------
S
F
--
D
----
E
D
-
G
T
-------
G
--
S
F
G
I
Y
S
-----
N
A
--
T
P
I
S
F
--
Q
-
M
--------
F
D
Y
----
K
IEEG
R
I
Y
I
-----------
Y
----
D
V
Y
P
D
E
------
K
----
T
P
Y
Y
L
15
Fugue
67.60
20%
-2
- C3 -
0.21
1GH5
-
?
A:
[1-87]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MINRT
D
C
NENS
Y
L
E
I
H
N
N
E
G
--------
R
D
T
L
C
----
F
A
--------------
N
A
--
G
----
T
M
-
P
V
AIY----
G
--
V
N
W
V
E
S
-----
G
N
--
N
V
V
T
L
--
Q
-
F
QRNLSDPR
L
E
T
----
I
----
T
L
Q
K
-----------
W
----
G
S
W
N
P
G
HI----
H
----
E
I
L
S
I
30
SP3
67.01
20%
74
- C3 -
0.18
1OQK
-
RNP1_METTH
A:
[9-86]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R
H
E
----
L
I
G
L
S
V
R
I
A
--------
R
S
V
H
R
DIQG
I
S
--------------
G
R
--
V
----
V
D
-
E
T
R------
N
--
T
L
R
I
E
M
-----
D
D
--
G
R
-
E
I
--
T
-
V
--------
P
K
G
----
I
----
A
V
F
H
-----------
F
----
R
-
T
P
Q
G
------
E
----
L
V
E
I
D
21
Fugue
65.52
16%
-83
- C4 -
-
4HE8
1
NQO14_THET8
I:
[1-427]
MTLAILAVFSVALTLLGFVLPPQGVKRATLLGLALALASLLLTWGKPFAFGPYAVDGVSQVFTLLALLGALWTVGLVRSGRFEFYLLVLYAALGMHLLASTRHLLLMLVALEALSLPLYALATWRRGQGLEAALKYFLLGALAAAFFLYGAALFYGATGSLVLGAPGEGPLYALALGLLLVGLGFKAALAPFHFWTPDVYQGSPTPVVLFMATSVKAAAFAALLRVAAPPEALALLVALSVVVGNLAALAQKEAKRLLAYSSIAHAGYMALALYTGNAQALGFYLLTYVLATGLAFAVLSQISPDRVPLEALRGLYRKDPLLGLAFLVAM
L
S
----
L
L
G
L
P
P
L
A
G
--------
F
W
G
K
Y
----
L
A
--------------
F
A
--
E
----
A
A
-
R
A
-------
G
--
A
W
G
V
L
V
-----
L
A
--
L
V
T
S
A
--
V
-
S
--------
A
Y
Y
----
Y
----
L
G
L
G
-----------
L
----
A
V
F
A
R
P
------
E
----
E
T
P
F
R
29
SP3
65.25
17%
-72
- C3 -
0.33
1BBZ
-
ABL1_HUMAN
A:
[1-58]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
----
F
V
A
L
Y
D
F
V
A
--------
S
G
D
N
T
----
L
S
--------------
I
T
--
K
----
G
E
-------------
K
L
R
V
L
G
-----
Y
N
--
H
N
G
E
-----
W
--------
C
E
A
----
Q
----
T
K
N
G
-----------
Q
----
G
W
V
P
S
-------
N
----
Y
I
T
P
V
32
SP3
64.39
17%
3
- C3 -
0.43
1PC0
-
RNP1_ARCFU
A:
[17-77]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
----
M
V
E
V
V
E
S
P
N
--------
H
S
E
V
G
----
I
K
--------------
G
E
--
V
----
V
D
-
E
T
Q------
N
--
T
L
K
I
M
T
-----
E
K
--
G
L
K
V
V
--
A
----------
K
R
G
----
R
----
T
F
R
V
-----------
W
----
Y
---
K
G
------
K
----
I
M
R
I
K
18
Fugue
62.24
16%
-10
- C3 -
0.26
2G0C
-
A:
[1-75]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
L
Y
F
N
G
G
--------
K
K
A
V
D
----
F
V
--------------
G
T
--
I
----
A
K
-
I
D
GVSADDI
G
--
I
I
T
I
M
D
-----
N
A
--
S
Y
V
E
I
LN
G
-
K
--------
G
P
H
----
V
----
L
K
V
M
-----------
K
----
N
T
T
V
Q
L
------
K
----
V
N
K
A
N
1
PsiBlast_PDB
60.51
33%
-40
- C4 -
-
3IPL
-
MENE_STAAN
A:
[5-78]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
Y
K
Q
A
Q
--------
Q
N
G
H
H
----
I
A
--------------
I
T
--
D
----
G
Q
-
E
S
-------
Y
--
T
Y
Q
N
L
Y
-----
C
E
--
A
S
L
L
A
--
K
-
R
--------
L
K
A
----
Y
----
Q
Q
----------------------------------------
17
Fugue
57.73
20%
5
- C4 -
-
1UAA
-
REP_ECOLI
A:
[2-640]
------------------------------------------------------------------------------------------RLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQANEEVRKRWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVVG
D
D
----
D
Q
S
I
Y
S
W
R
G
--------
A
R
P
Q
N
----
L
V
--------------
L
L
--
S
----
Q
D
F
P
A
-------
L
--
K
V
I
K
L
E
-----
Q
N
--
Y
R
S
S
G
--
R
-
I
--------
L
K
A
----
A
----
N
I
L
I
ANNPHVFEKRL
F
----
S
E
L
G
Y
G
------
A
----
E
L
K
V
L
11
HHSearch
56.69
18%
93
- C4 -
-
3ZPL
-
?
E:
[62-127]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
K
L
A
E
S
P
R
RR------
L
R
M
T
E
----
L
A
--------------
K
Y
--
A
KITR
S
R
-
L
S
-------
H
--
A
V
A
R
L
E
-----
K
N
--
G
W
V
R
R
--
E
D
C
--------
P
S
D
----
K
----
R
G
Q
F
-----------
A
----
I
L
T
D
E
G
------
Y
----
E
V
---
14
Fugue
55.62
14%
-10
- C4 -
-
5THY
1
?
A:
[19-405]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YFQSNALPPDFLLDPVEVSQQLAPSLTELVTLLDNARTSEIGTQLEELSVDYIVQGLLQMGWSYQPTESFDLDAAAQCLGVVPTQVRLFERLLQILAEVGILQSNQQQWQVQKTAQKVNPSKQSQSLLSQYPDEAATLTLLERCASQL
S
G
----
V
L
----
R
G
E
--------
I
D
P
V
Q
----
L
V
--------------
F
P
--
Q
----
G
D
-
L
T
-------
T
--
A
T
Q
L
Y
K
-----
D
S
--
A
V
A
K
V
M-
N
-----------
T
I
----
V
----
E
K
V
I
M----------
K
AM--
E
K
L
P
P
S
------
R
----
G
I
R
L
L
37
SP3
54.22
24%
43
- C3 -
1XAK
-
NS7A_CVHSA
A:
[-1-67]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
Y
H
Y
Q
E
C
V
--------
R
G
T
T
V
----
I
L
---------------
K
--
E
----
P
C
-
P
S
-------
G
--
T
Y
E
G
N
S
PFHPL
A
D
--
N
K
F
A
L
--
T
------------
C
----
T
----
S
T
H
F
-----------
A
----
F
A
C
A
D
G
------
T
RHTY
Q
L
R
A
R
28
SP3
53.77
19%
79
- C3 -
0.26
1D09
-
PYRI_ECOLI
B:
[101-153]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERIDNVL
V
C
---------------------
P
N
S
N
C
----
I
S
--------------
H
A
--
E
----
P
V
-
S
S
----------
S
F
A
V
R
K
-----
R
A
--
N
D
I
A
L
--
K
-
C
--------
K
Y
C
----
E
----
K
E
F
S
-----------
H
----
N
V
V
L
A
N
----------------
23
Fugue
53.31
17%
-3
- C4 -
-
2M8G
-
?
X:
[428-497]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TS
S
E
----
L
P
E
L
L
R
K
R
E
--------
R
K
T
G
D
----
L
P
--------------
K
F
IE
E
----
T
E
-
K
K
-------
R
--
I
I
E
A
L
E
-----
K
T
--
G
Y
V
K
S
--
R
-
A
--------
A
K
L
LGYT
L
----
R
Q
L
D
-----------
Y
----
R
I
K
K
Y
G
------
I
----
E
L
K
K
F
31
SP3
52.73
9%
-18
- C- -
-
1IGQ
-
KORB2_ECOLX
A:
[305-358]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
----
A
I
V
Q
V
E
H
D
E
--------
R
P
A
R
L
----
I
L
--------------
N
R
--
R
----
P
P
-
A
E
-------
G
--
Y
A
W
L
K
Y
-----
E
D
DG
Q
E
F
E
A
--
N
-
L
--------
A
D
V
----
K
----
L
V
A
L
-----------
I
----
E
G
--------------------
35
SP3
52.12
12%
25
- C3 -
0.23
1DD2
-
BCCP_PROFR
A:
[47-123]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
G
A
G
K
--------
A
G
E
G
E
----
I
P
APLAGTVSKILVKE
G
D
TV
K
----
A
G
-
Q
T
----------
V
L
V
L
E
A
-----
M
K
--
M
E
T
E
I
--
N
-
A
P-------
T
D
G
----
K
----
V
E
K
V
-----------
L
VKER
D
A
V
Q
G
G
------
Q
----
G
L
I
K
I
33
SP3
48.11
12%
99
- C3 -
-
1PWT
-
?
?:
[1-61]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGTGK
E
L
----
V
L
A
L
Y
D
Y
Q
E
--------
K
S
P
R
E
----
V
T
--------------
M
K
--
K
----
G
D
-------------
I
L
T
L
L
N
-----
S
T
--
N
K
-----
D
-
W
--------
W
K
V
----
E
----
V
N
D
R
-----------
Q
----
G
F
V
P
A
-------
A
----
Y
V
K
K
L
7
HHSearch
47.04
23%
56
- C5 -
-
3UAF
-
TTR52_CAEEL
A:
[45-77]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
D
L
W
D
A
A
A
AA------
A
E
S
D
D
----
L
M
--------------
G
R
--
T
W---
S
D
-
R
N
-------
G
--
N
F
Q
V
T
G
-----
C
---------------------------------------------------------------------------