@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BdBar_068820T0_kcl10: (2019-03-29 )
WDERVCQVTVFYPGKETGTLMPHLMEPEEPIMIPKINGKRYYAVSDANCKYKRYDLDPEGNPWPSGLRVKGV
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....---...-------.10..-......20....-----------------...-.30-----------...-....--..40..--..-...---.50-----........--.60.-.----......70.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WDE
R
V
---
C
Q
V
-------
T
V
F
YP-GKETGTLMPHLM-----------------EPE-E
P
------------
I
M
I
-
P
KIN--G
K
R
Y
Y
A
--VS-DAN---
C
K
------
Y
K
RYDLDP--EGNP-W----PS
G
L
R
VKGV
1
PsiBlast_PDB
94.56
29%
0
- C- -
-
5A31
-
APC1_HUMAN
A:
[702-668]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
48
Fugue
66.46
25%
-26
- C12 -
-
5UDF
-
?
A:
[13-223]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRELKNRVLGMVPQATVSSTQILTD
W
P
E
L
V
---
K
R
V
ENHPHVT
G
V
A
P
F
-
T
Q
L
Q
G
M
L
T
A
Q
-------------------
G
Q
V
-
A
G
------------
I
M
V
-
T
G
I
D
--
P
K
Y
E
K
N
--
V
S
-
I
I
Q
---
N
H
------
I
V
A
G
S
L
D
S
L-
K
K
G
E
-
F
-----------
G
I
8
PsiBlast_PDB
65.47
29%
-
- C17 -
5L9T
-
APC1_HUMAN
A:
[1072-1246]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
7
PsiBlast_PDB
65.47
29%
-
- C17 -
5L9U
-
APC1_HUMAN
A:
[1072-1251]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
6
PsiBlast_PDB
65.47
29%
-
- C17 -
5KHR
-
APC1_HUMAN
A:
[1072-1222]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
9
PsiBlast_PDB
65.44
29%
-
- C17 -
5KHU
-
APC1_HUMAN
A:
[1072-1242]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
46
Fugue
61.58
17%
1
- C12 -
-
2MYW
-
?
A:
[7-85]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGRENLY
F
Q
G
H
M
AAP
A
R
F
-------
C
V
Y
Y
D
-
G
H
L
P
A
T
R
V
L
L
M
Y
-----------------
V
R
I
-
G
T
------------
T
A
T
-
I
T
A
R
--
G
H
E
F
E
V
--
E
A
K
D
Q
N
---
C
K
------
V
I
L
----
T
--
N
G
K
Q
-
A
----
P
D
W
L
A
A
E
P
Y
2
PsiBlast_PDB
60.95
29%
43
* C17 *
5LCW
-
APC1_HUMAN
A:
[1072-1213]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
41
SP3
59.85
18%
12
- C14 -
-
1G2O
2
PUNA_MYCTU
A:
[7-268]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPDELARRAAQVIADRTGIGEHDVAVVLGSGWLP
A
V
A
A
L
---
G
S
P
-------
T
T
V
L
P
-
Q
A
E
L
----
P
G
F
V
-----------------
P
P
T
-
A
A
GHAGE-------
L
L
S
-
V
P
I
G
--
A
H
R
V
L
V
--
L
A
-
G
R
I
---
H
A
------
Y
E
G
H
D
L
R
Y
--
V
V
H
P
V
R
------
A
A
R
A
A
G
A
3
PsiBlast_PDB
58.69
29%
60
- C17 -
4UI9
-
APC1_HUMAN
A:
[1072-1209]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
43
Fugue
58.14
29%
55
- C10 -
-
4FYP
-
VSP1_ARATH
A:
[34-261]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLSINYPNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWS
W
L
E
S
G
---
E
S
T
-------
P
G
L
----
P
E
T
L
H
L
Y
E
N
L
L
-----------------
E
L
G
I
E
P
------------
I
I
I
-
S
D
R
W
---
K
K
L
S
E
--
V
T
-
V
E
N
---
L
K
AVGVTK
W
K
H
L
I
L
K
P
--
N
G
S
K
------
L
T
Q
V
V
Y
K
S
K
5
PsiBlast_PDB
58.08
29%
62
- C17 -
5G05
-
APC1_HUMAN
A:
[1072-1166]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
4
PsiBlast_PDB
57.84
29%
69
- C17 -
5G04
-
APC1_HUMAN
A:
[1072-1210]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
C
Q
R
-------
T
M
A
L
P
V
G
R
G
M
F
T
L
F
S
Y
H
P
-----------------
V
P
T
-
E
P
------------
L
P
I
-
P
K
L
N
LT
G
R
A
P
P
R
--
N
T
-
T
V
D
---
L
N
------
S
G
N
I
D
V
P
P
--
N
M
T
S
-
W
----
A
S
-------
33
SP3
57.44
22%
115
- C12 -
-
1H6L
-
PHYT_BACSD
A:
[1-353]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLSDPYHFTVNAAAETEPVDTAGDAADDPAIWLDPKNPQNSKLITTNKKSGLAVYSLEGKMLHSYHTGKLNNVDIRYDFPLNGKKVDIAAASN
R
S
E
G
K
---
N
T
I
-------
E
I
Y
A
I
-
D
G
K
N
G
T
L
-
Q
S
I
T
-----------------
D
P
N
-
R
P
IASAIDEVYGFS
L
Y
H
-
S
Q
K
T
--
G
K
Y
Y
A
M
--
V
T
-
G
K
E
---
G
E
------
F
E
Q
Y
E
L
N
A
--
D
K
N
G
-
Y
----
I
S
G
K
K
V
R
A
F
51
Fugue
53.55
10%
-112
* C12 *
-
2MM2
-
?
A:
[1-65]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
---
C
T
A
-------
N
I
L
N
I
-
N
E
V
--
V
I
A
T
G
C
V
-----------------
P
A
G
-
G
N
------------
L
I
I
-
R
V
G
S
--
D
H
S
Y
L
I
--
R
A
-
T
V
S
---
C
G
------
L
S
L
N
P
S
Q
S
--
F
I
N
G
-
E
------
S
L
A
S
G
G
R
56
Fugue
51.97
19%
-20
- C10 -
-
4V0B
-
FTSH_ECOLI
A:
[8-70]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
-
K
V
D
Y
S
T
F
L
Q
E
V
N
-----------------
N
D
Q
---------------
V
R
E
-
A
R
I
N
--
G
R
E
I
N
V
--
T
K
-
K
D
S
---
N
R
------
Y
T
T
Y
I
--
P
--
V
Q
D
P
K
L
----
L
D
N
L
L
T
K
N
V
47
Fugue
51.61
21%
-6
- C10 -
-
4YJ1
1
?
A:
[1-615]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GFSPLMDFFHSVEGRNYGELRSLTNETYQISENVRCTFLSIQSDPFAPGSQVRLVCPCTFSLEKVLQTTDLAAANPCRRVAAEDFILRSFHAGYRNGIPRRTSGAVQVLRPSQHVLERSTVGLVKAHQAEIEIFARVKLPGHGRRIDGHGAIDIFYNELVPLLEQCVVGLNEEDLHQHVICVHDQEVLRSNLLGAGYVAFVANGAILPRDAGNSDKPLRDNAVPFQSPKSLECSFTLPHSGKTITGMGLPPGLTLIAGGGFHGKSTLLRALEVGIYNHVPDDGRTYVVVDPTAVKIRAEDRRSVHGVDISPFINNLPFGKTTNFFVTADASGSTSQAANIMEALELGSQLLL
L
D
E
D
T
---
C
A
T
-------
N
L
M
Y
R
-
D
A
L
M
Q
M
L
V
P
R
A
Q
-----------------
E
P
I
-
T
P
------------
F
V
E
---------
R
V
A
D
--
L
S
-
Q
N
H
---
G
V
------
S
S
I
M
V
I
G
G
--
S
G
Q
Y
-
F
----
P
Q
A
R
V
V
L
V
M
50
Fugue
49.70
23%
24
- C7 -
-
3ABZ
4
?
A:
[2-845]
SKFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAVRVSDGPNGIRGTKFFDGVPSGCFPNGTGLASTFDRDLLETAGKLMAKESIAKNAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGEGIAATVKHFVCNDLEDQRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTYTTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTGIVENGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKKEDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKANPNTVIVNQSGTPVEFP
W
L
E
D
A
N--
A
L
V
-------
Q
A
W
Y
G
-
G
N
E
L
G
N
A
I
A
D
V
L
YGDVVPNGKLSLSWPFK
L
Q
D
-
N
P
------------
A
F
L
N
F
K
T
E
--
F
G
R
V
I
Y
--
G
E
-
D
I
F
---
V
G
------
Y
R
Y
Y
E
K
L
Q
--
R
K
V
A
-
F
----
P
F
G
---
Y
G
L
45
Fugue
49.39
21%
34
- C8 -
-
2HEQ
-
YORP_BACSU
A:
[1-84]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAGDPLPKY
W
S
Y
P
V
---
G
L
A
-------
V
E
I
N
N
-
N
A
R
Y
G
--
C
P
H
H
V
-----------------
G
R
K
-
G
K
------------
I
I
E
-
H
L
H
S
--
A
T
Y
D
Y
A
--
V
S
-
D
E
T
GDI
T
Y
------
F
K
E
H
E
L
T
P
LK
G
G
L
A
-
Y
----
V
L
E
H
H
H
H
H
H
40
SP3
48.92
15%
-7
- C- -
-
1U6D
-
KEAP1_HUMAN
X:
[322-609]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKVGRLIYTAGGYFRQSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSH
G
C
I
H
H
---
N
S
V
-------
E
R
Y
E
P
-
E
R
D
E
W
H
L
V
A
P
M
L
-----------------
T
R
R
-
I
G
------------
V
G
V
-
A
V
L
N
--
R
L
L
Y
A
V
GG
F
D
-
G
T
N
---
R
L
------
N
S
A
E
C
Y
Y
P
--
E
R
N
E
-
W
RMIT
A
M
N
T
I
R
S
G
A