@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : CH1881_037140T0_kcl74: (2019-03-29 )
QDLRRPLLCDVYIEYPSGQVFDQALGHDIVPAGETAEISGFKCKTVRGTCV
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...------..---..-..10------.---......-..----20------...------..-------------..--------.--30.--.----..----------.-----..-.-40..-----..-----..-.-.50
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QDL------RR---
P
L
-
L
C
D
-------
V
---
Y
I
EYPS-
G
Q
----
V
F
------
D
Q
A
------LG-------------HD--------I--VPA--G----ET----------A-----EI-S-G
F
K
C
-----KT-----VR-G-TCV
26
SP3
72.27
25%
55
- C11 -
0.30
1E2W
-
CYF_CHLRE
A:
[169-232]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIYNASAAGKIVAI
T
A
L
------
S
E
---
K
K
G
G
F
E
-------
V
---
S
I
E
K
A
N
-
G
E
----
V
V
------
V
------------------------
D
--------
K
--
I
P
A
--
G
----
P
D
----------
L
-----
I
V
-
K
E
G
--------
Q
T
-----
V
Q
A
D
-
Q
P
L
33
Fugue
64.78
27%
-68
- C10 -
-
2KGH
-
TXP2_BRARH
A:
[1-39]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
F
------
E
C
---
V
F
-
S
C
D
-------
I
-------------------------
K
K
------
E
G
-------------
K
P
--------
C
--
K
P
K
--
G
----
E
K
----------
K
-----
C
T
-
G
-
G
W
R
C
-----
K
I
--------
K
-
L
C
L
24
SP3
62.72
23%
112
- C12 -
-
1YUA
-
?
?:
[66-122]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
K
L
------
R
-----
Y
-
L
A
D
-------
A
---
P
Q
Q
D
P
E
-
G
N
KTMV
R
F
------
S
R
K
------
T
K
-------------
Q
Q
--------
Y
--
V
S
S
--
E
----
K
D
----------
G
-----
K
A
-
T
-
G
W
S
A
-----
F
Y
-----
V
D
-
G
-
K
W
V
29
Fugue
60.78
27%
-52
- C11 -
0.29
5TC1
-
MATA_BPMS2
M:
[1-393]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRAFSTLDRENETFVYRSNWTPGRFNSTGAKTKQWHYPSPYSRGALSVTSIFSLDARSCYSLFPVSQNLTYIEVPQNVANRASTEVLQKVTQGNFNLGVALAEARSTASQLATQTIALVKAYTAARRGNWRQALRYLALNEDRKFRSKHVAGRWLELQFGWLPLMSDIQGAYEMLTKVHLQEFLPMRAVRQVGTNIKLDGQTTCNISRRIVIWFYINDARLAWLSSLGILNPLGIVWEKVPFSFVVDWLLPV
G
N
M
------
L
E
---
G
L
-
T
A
P
-------
V
---
G
C
S
Y
M
S
-
G
T
----
V
T
------
D
V
I
------
T
G
-------------
E
S
--------
I
--
I
Q
G
--
T
----
A
K
----------
A
-----
Q
I
-
S
-
A
M
H
R
-----
G
V
QSVWP
T
T
-
G
-
A
Y
V
30
Fugue
60.47
23%
23
- C15 -
-
2JUB
-
IPI1_BPT4
A:
[1-76]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
T
L
------
T
S
---
E
V
-
I
K
A
NKGREGK
P
---
M
I
S
L
V
D
-
G
E
----
E
I
------
K
G
T
------
V
Y
LGDGWSAKKDGAT
I
V
--------
I
--
S
P
A
--
E
----
E
T
----------
A
LFKAK
H
I
-
S
-
A
A
H
L
-----
K
I
-----
I
A
-
K
-
N
L
L
2
PsiBlast_PDB
60.43
47%
0
- C- -
-
5YKO
-
JMJ14_ARATH
A:
[17-99]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---
P
L
-
V
D
D
-------
A
---
P
I
F
Y
P
T
-
N
E
----
D
F
------
D
D
P
------
L
G
-------------
Y
---------------------------------------------------------------------
1
PsiBlast_PDB
60.43
47%
0
- C- -
-
5YKN
-
JMJ14_ARATH
A:
[17-108]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---
P
L
-
V
D
D
-------
A
---
P
I
F
Y
P
T
-
N
E
----
D
F
------
D
D
P
------
L
G
-------------
Y
---------------------------------------------------------------------
40
Fugue
60.33
17%
21
- C15 -
-
1GZS
-
SOPE_SALTM
B:
[1-165]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSLTNKVVKDFMLQTLNDIDIRGSASKDPAYA
S
Q
T
------
R
E
---
A
I
-
L
S
A
-------
V
---
Y
S
K
N
K
D
-
Q
C
----
C
N
------
L
L
I
------
S
K
-------------
G
I
NIAPF---
L
--
Q
E
I
--
G
----
E
A
----------
A
-----
K
N
-
A
-
G
L
P
G
-----
T
T
-----
K
N
-
D
-
V
F
T
28
SP3
58.96
19%
2
- C12 -
-
1PTQ
-
?
?:
[1-50]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HRFKV
Y
N
Y
------
M
S
---
P
T
-
F
C
D
-------
H
--------
C
-
G
S
----
L
L
------------------------------
W
G
--------
L
--
V
K
Q
--
G
----
L
K
----------
C
-----
E
D
-
C
-
G
M
N
V
HHKCR
E
K
-----
V
A
-
N
-
L
C
-
32
Fugue
58.86
18%
-82
* C12 *
-
2JMD
-
A:
[1-63]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
P
L
------
G
S
---
K
Y
-
E
C
P
-------
I
---
C
L
M
A
L
R
-
E
A
----
V
Q
------
T
P
C
-------
G
-------------
H
R
--------
F
--
C
K
A
CI
I
----
K
S
----------
I
-----
R
D
-
A
-
G
H
K
C
-----
P
V
-----
D
N
-
E
-
I
L
L
27
SP3
57.68
25%
112
* C13 *
-
1PCE
-
?
?:
[1-60]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
K
Q
VFS---
R
M
---
P
I
--
C
E
-------
H
---
M
T
E
S
P
D
C
S
R
----
I
Y
------
D
P
V
------
C
G
-------------
T
D
----------------
G
----
V
T
YESECKLCLA
R
-----
I
E
-
N
-
K
Q
D
I
-----
Q
I
-----
V
K
D
G
-
E
C
-
23
SP3
57.60
19%
-33
- C8 -
-
1ATX
-
?
?:
[1-46]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
A
---
A
C
-
L
C
K
-------
S
---
D
G
P
N
T
R
-
G
N
----
S
M
------
S
G
T
------
I
W
-------------
V
F
--------
G
--
C
P
S
--
G
WNNC
E
G
----------
R
-----
A
I
-
I
-
G
Y
C
C
-----
K
Q
-------------
37
Fugue
57.52
27%
71
- C10 -
-
3WA1
-
?
A:
[19-407]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TNYPLNTTPTSLNYNLPEISKKFYNLKNKYSRNGYGLSKTEFPSSIENCPSNEYSIMYDNKDPRFLIRFL
L
D
D
------
G
R
---
Y
I
-
I
A
D
--------------
R
D
D
-
G
E
----
V
F
------
D
E
A
PTYLDN
N
N
-------------
H
P
--------
I
--
I
S
R
--
H
----
Y
T
----------
G
-----
E
E
-
R
-
Q
K
F
E
-----
Q
V
-----
G
S
-
G
-
D
Y
I
25
SP3
57.16
21%
7
* C10 *
-
1TOC
-
ORNT_ORNMO
R:
[57-119]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HS
S
E
M
HSSCLG
D
P
---
P
T
-
S
C
A
-------
E
GTD
I
T
Y
Y
D
S
-
D
S
----
K
T
------
C
K
V
------
L
A
-------------
A
S
-----------
C
P
S
--
G
----
E
N
----------
T
-----
F
E
-
S
-
E
V
E
C
-----
Q
V
-----
A
C
-
G
-
A
P
I
41
Fugue
56.61
16%
-13
* C11 *
0.34
2N2J
-
EBNA2_EBVB9
A:
[1-62]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
A
M
------
E
M
---
P
----
T
-------
F
---
Y
L
A
L
H
G
-
G
Q
----
T
Y
------
H
L
I
------
V
D
-------------
T
D
SLGNPSLS
V
--
I
P
S
--
N
----
P
Y
----------
Q
-----
E
Q
-
L
-
S
D
T
P
-----
L
I
-----
P
L
-
T
-
I
F
V
21
SP3
56.59
19%
-17
- C11 -
0.21
1H9R
-
MODE_ECOLI
A:
[78-139]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNQLPGII
S
H
I
------
E
R
G--
A
E
-
Q
C
E
-------
V
---
L
M
A
L
P
D
-
G
Q
----
T
L
CATVPV
N
E
A
------
T
S
--------------------------
L
Q
Q
--
G
----
Q
N
----------
V
------
T
-
A
-
Y
F
N
A
-----
D
S
-----
V
I
-
I
-
A
T
L
34
Fugue
52.37
19%
28
- C15 -
-
5IER
1
?
A:
[2-132]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSPALIASQSLWRCTQAHDR
E
G
W
------
L
A
---
L
M
-
A
D
D
-------
V
---
V
I
E
T
P
I
-
G
K
----
S
V
------
T
N
P
------
D
G
-------------
S
G
--------
I
--
K
G
K
--
E
----
A
V
----------
G
-----
A
F
-
F
-
D
T
H
I
-----
A
A
-----
T
R
-
L
-
T
V
T
44
Fugue
50.20
23%
49
- C13 -
-
3PSI
-
SPT6_YEAST
A:
[312-1210]
EGDMKIRKTDIPERYQELRAGITDYGNMSSEDQELERNWIAEKISVDKNFDANYDLTEFKEAIGNAIKFITKENLEVPFIYAYRRNYISSREKDGFLLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDPIVTEYFKNQNSLQDIYDYLEFKYANEINEMFINHTPLYQAVSDIGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESITKLAIDTVQKYYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRRDPDVFLKMVEAESLSVKLHMSSQAQYIEHLFQIALETTNTSDIAIEWNNFRKLAFNQAMDKIFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRDPKIPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTSEEVRSLSIHPHQNLLSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWDQLDSTRIHPEDYHLATKVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRKLNNLNTIVLELLDGF
E
E
L
------
R
N
DFH
P
L
-
Q
G
D
-------
E
---
I
F
Q
S
L
T
-
G
E
----
S
E
------
K
T
F
------
F
K
-------------
G
S
--------
I
--
I
P
V
--
R
----
V
E
----------
R
-----
F
W
H
N
-
D
I
I
C
-----
T
T
-----
N
S
-
E
V
E
C
V
20
SP3
49.51
17%
-61
- C9 -
-
1QJK
-
MTA_STRPU
A:
[1-36]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
D
-
V
K
----
C
V
------
C
C
T
------
E
G
-------------
K
E
--------
C
--
A
C
F
--
G
----
Q
D
----------
C
-----
C
V
-
T
-
G
E
C
C
-----
K
D
--------
G
-
T
C
C
12
HHSearch
48.45
27%
-268
* C14 *
-
3H3E
-
?
A:
[243-266]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
D
----
I
F
------
K
R
E
------
F
L
-------------
G
K
--------
I
MD
C
Y
A
--
G
----
L
K
----------
L
-----
E
V
-
S
-------------------------
User Run . : Multi Template Modeling Result:
(1 SA)
.........10........20........30........40........50
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
QDLRR
P
L
L
C
D
V
Y
I
EYPS
G
Q
V
F
D
Q
A
LGHDIVPAGETAEISG
F
K
C
KTVRGTCV
45
100.00
100%
0
- C- -
M045
-
A:
[1-51]
Q
D
L
R
R
P
L
L
C
D
V
Y
I
E
Y
P
S
G
Q
V
F
D
Q
A
L
G
H
D
I
V
P
A
G
E
T
A
E
I
S
G
F
K
C
K
T
V
R
G
T
C
V