@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : DsLIZ_105880T0: (2019-03-29 )
GECHITIWEGNTPIGTEIAIEGREYVTIAGYQCNAGAGCTAHCIGLPKNLKERGVYH
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10.-...--..-------.-.20.-.-.--.....30.-..-.---....--40-..--.---.-.....50..-.--...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
E
C
H
I
T
I
W
EGNT-PIG--
T
E
-------
I
-
A
IEG-R-
E
--
Y
V
T
I
A
G
Y
Q-CN-A---GAG
C
--
T
--
A
H
--C---I-GLP
K
N
L
K
ER-G--VYH
28
SP3
78.81
26%
-29
- C3 -
-
1HV9
2
GLMU_ECOLI
A:
[4-452]
NAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLR
G
T
L
T
H
---
G
R
D
V
-
E
I
D
--
T
N
-------
V
-
I
I
E
G
------
N
V
T
L
-
G
H
R
-
V
K
-
I
---
G
T
G
C
--
V
--
I
K
NS
V
---
I
-
G
D
D
C
E
I
S
P
Y
-
T
--
V
V
E
23
SP3
69.70
21%
-35
* C3 *
-
1V3W
4
?
A:
[1-173]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAIYEINGKKPRIHPSAFVDENAVVI
G
D
V
V
L
---
E
E
K
T
-
S
V
W
--
P
S
-------
A
-
V
L
R
G
D
I
-
E
--
Q
I
Y
V
-
G
K
Y
-
S
N
-
V
---
Q
D
N
V
--
S
--
I
H
--
T
S--
H
-
G
Y
P
T
E
I
G
E
Y
V
T
--
I
G
H
26
SP3
66.17
26%
-56
- C3 -
-
1HV9
1
GLMU_ECOLI
A:
[252-452]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VMLRDPARFDLR
G
T
L
T
H
---
G
R
D
V
-
E
I
D
--
T
N
-------
V
-
I
I
E
G
------
N
V
T
L
-
G
H
R
-
V
K
-
I
---
G
T
G
C
VI
K
--
N
S
--
V
---
I
-
G
D
D
C
E
I
S
P
Y
-
T
--
V
V
E
19
HHSearch
58.11
24%
-332
- C6 -
0.10
1KHX
-
SMAD2_HUMAN
A:
[275-303]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
S
I
A
Y
Y
E
L
N
Q
-
R
V
G
--
E
T
-------
F
-
H
A
S
--
Q
-
P
--
S
L
T
V
D
G
F
T
-------------------------------------------
13
HHSearch
57.99
24%
-345
- C6 -
0.14
1U7V
-
SMAD2_HUMAN
A:
[275-303]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
S
I
A
Y
Y
E
L
N
Q
-
R
V
G
--
E
T
-------
F
-
H
A
S
--
Q
-
P
--
S
L
T
V
D
G
F
T
-------------------------------------------
30
SP3
56.62
19%
-118
- C5 -
-
1JPN
3
SRP54_THEAQ
A:
[89-296]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
A
R
L
-
P
V
---------------
L
K
D
-
R
-
N
--
L
W
F
L
V
G
L
Q
--------
G
S
G
K
--
T
--
T
T
--
A
---
A
-
K
L
A
L
Y
Y
K
G
K
-
G
---
R
R
17
HHSearch
56.60
27%
-158
- C6 -
1YGS
-
SMAD4_HUMAN
A:
[324-389]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
S
I
A
Y
F
E
M
D
V
-
Q
V
G
--
E
T
-------
F
-
K
V
P
S
-
S
C
P
--
I
V
T
V
D
G
Y
V
-------------------------------------------
20
HHSearch
54.78
24%
-247
- C6 -
0.15
1MK2
1
A:
[14-42]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
S
I
S
Y
Y
E
L
N
Q
-
R
V
G
--
E
T
-------
F
-
H
A
S
--
Q
-
P
--
S
M
T
V
D
G
F
T
-------------------------------------------
16
HHSearch
53.31
21%
-313
- C6 -
0.12
3GMJ
-
MAD_DROME
A:
[262-290]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
S
I
A
Y
Y
E
L
N
C
-
R
V
G
--
E
V
-------
F
-
H
C
N
N
---
N
--
S
V
I
V
D
G
F
T
-------------------------------------------
12
HHSearch
53.24
21%
-313
* C6 *
0.14
3DIT
-
MAD_DROME
C:
[262-290]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
S
I
A
Y
Y
E
L
N
C
-
R
V
G
--
E
V
-------
F
-
H
C
N
--
N
-
N
--
S
V
I
V
D
G
F
T
-------------------------------------------
24
SP3
50.71
19%
-2
- C5 -
-
1Q2Y
-
YJCF_BACSU
A:
[1-140]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKAVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDELEN
E
S
E
H
I
V
V
Y
D
G
E
K
-
P
V
G
--
A
G
-------
R
-
W
R
M
K
-
D
-
G
--
Y
G
K
L
E
R
I
C
-
V
L
-
K
SHR
S
A
G
V
--
G
--
G
I
--
I
---
M
K
A
L
E
K
A
A
A
D
G
-
G
--
A
S
G
25
SP3
49.43
19%
3
- C3 -
-
1QRE
-
CAH_METTE
A:
[38-247]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVDEFSNIRENPVTPWNPEPSAPVIDPTAYIDPQASVI
G
E
V
T
I
---
G
A
N
V
-
M
V
S
PM
A
S
-------
I
-
R
S
D
E
-
G
-
M
--
P
I
F
V
-
G
D
R
-
S
N
-
V
---
Q
D
G
V
--
V
--
L
H
--
A
LET
I
-
N
E
E
G
E
P
I
E
D
-
N
--
I
V
E
22
SP3
48.10
10%
-126
- C3 -
-
1OCX
-
MAA_ECOLI
A:
[1-182]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEAYIEPTFRCD
Y
G
Y
N
I
F
L
G
N
N
F
F
--
A
N
--
F
D
-------
C
-
V
M
L
D
-
V
-
C
--
P
I
R
I
-
G
D
N
-
C
M
-
L
---
A
P
G
V
--
H
IY
T
A
--
T
---
H
-
P
I
D
P
V
A
R
N
S
-
G
--
A
E
L
10
HHSearch
48.07
21%
-206
- C- -
-
4R9P
-
?
A:
[58-85]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
K
V
I
V
F
E
R
N
R
-
R
V
A
--
K
A
-------
Y
-
A
R
A
----
P
--
V
L
T
I
N
G
S
D
-------------------------------------------
21
SP3
47.92
19%
22
- C3 -
-
1KRR
2
THGA_ECOLI
A:
[2-201]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYG
S
N
I
H
I
---
G
R
N
F
-
Y
A
N
--
F
N
-------
L
-
T
I
V
D
-
D
-
Y
--
T
V
T
I
-
G
D
N
-
V
L
-
I
---
A
P
N
V
--
T
LS
V
T
--
G
---
H
-
P
V
H
H
E
L
R
K
N
-
G
--
E
M
Y
14
HHSearch
47.17
29%
-153
- C6 -
5XOD
-
A:
[16-48]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
S
I
A
Y
Y
E
L
N
Q
-
R
V
G
--
E
T
-------
F
H
A
S
Q
----
P
--
S
L
T
V
D
G
F
T
-------------------------------------------
33
Fugue
46.18
29%
19
- C5 -
-
4QGL
-
MTND_BACAN
A:
[1-174]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA
A
M
A
Q
I
R
I
H
E
V
N
T
-
R
I
E
--
N
E
-------
V
-
K
V
S
K
-
F
-
L
--
Q
E
E
G
V
L
Y
E
K
W
N
-
I
---
S
K
------------------
L
P
P
H
L
N
E
N
-----
Y
S
40
Fugue
44.57
20%
-113
- C2 -
-
4J1Q
1
A:
[20-445]
-----------------------------------------------------------------------------------------------------------------------------------HMERLMLEPVWEKQNEELSYTEHIIVLFETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAGRIIIQAIVPLEKEKQLFAGVSGLFKTAEIEFSKLTAQVIEIEKPEEM
I
D
L
H
L
K
L
K
D
D
S
R
R
P
F
D
--
K
Q
-------
I
-
R
Y
E
A
-
G
----
Y
R
F
V
K
G
W
R
-
E
M
-
V
---
D
T
------------------
L
H
M
P
W
R
D
E
-
G
--
V
Y
L
43
Fugue
43.53
22%
29
- C2 -
-
3GGQ
-
A:
[6-149]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SRPFSVLRANDVLWLSLTAAEYDQSTYGSSTGPVYVSDSVTLVNVATGAQAVARSLDWTKVTLDGRPLSTIQQHSKTFFVLPLRGKLSFWEAG
T
T
K
A
G
Y
P
Y
N
Y
N
T
-
T
A
S
--
D
Q
-------
L
-
L
V
E
N
-
A
-
A
GH
R
V
A
I
S
T
Y
T
-
T
S
-
L
---
G
A
G
------------------
P
V
S
I
S
A
V
-
A
--
V
L
A
42
Fugue
43.45
17%
-19
- C2 -
-
4ESN
-
?
A:
[16-93]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
F
Q
G
A
V
V
T
V
D
G
E
-
V
Y
G
--
T
Y
SLAKDQT
I
-
E
I
Q
D
-
G
-
N
--
R
L
R
I
Q
N
G
Q
-
A
K
M
E
---
W
A
D
C
--
P
--
D
Q
--
L
---
C
-
V
H
Q
K
A
I
S
R
T
-
G
ES
I
I
C