@TOME V2.3
(Mar 2018)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : B0VRC9: (2017-12-02 )
MLFYKNILTLSILAAISIPVFAAENENVEKLETIRIKAHPLEQTSKDFAVADTVVDQKHLTEGAATIGDALNSEVGIYANQFGAGSSRPVIRGQDGPRVKVLQNSSENVDVSTLSPDHAVTVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQIPENGYEGQVGLRYNTGSDEKLASAGVTVGLGSQVALRIEGLTRDANNYIAPNYIHEGEKERRVDNTFAQGDSVNVGLSWVYDRGYTGISYSNRRDQYGLPGHSHEYETCHIHDLSLHCGDHDHEGHSDEEAHDHEHEHGGPWIDLKSERYDFKTELNDPFAGFQKLRAQASYTDYQHDEIEEGTIATRFQNKGYDGRIELVHNPIADWEGVIGTQLGQQKLNLTGEEAFMAPTTTKKWSVFALEHKQWKDVHFELSARADQQEIDVDDNSKQDFDGSAFSYAGAANWEFAPNYKLSFVASHQERLPLAQELYANGGHFATNTYELGNDQLSKEKSNNVELGLHFDNDKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQYTQDKARFYGAEGEIGYQITPMYKISAFGDYVRGKIDAEGNAPRIPAGRLGTKVDADFGDGFSGSAEYYHVFNQDKIAAYETETEGYNMLNLGVAYSGQYGAKTDYRVYLKANNLLDDTVYQHASFLSNIPQVGRNFTVGVDFSF

Atome Classification :

(20 SA) .........10........20........30........40----....----.....50........60.-....-...70........80..-.--.-.--...90..-....--..100.......110..---.....--120---------.....-....130.......140.......150.......-160....--...170.......----180.-.......190.--.......200...--....210.......220.......230......-----------------------------------------------.240.-......250...-....260.......270--.------------------..--..-...280-----...-------------..----...290----------------------------------------.......300...---....310.......320-........330-----------------------.........340..---------------------------.----.--...-..350.......360.--.-..--...370.......380...----.--.------.-----------------------------------------.390.-----------------------------------------------......400........410.-........420...----------------------------------...-.430-------------.---......--------------..440.......450.......460--..-.....470.......480--.........490.......500.....-------.--.510.......520.......530----..------.------------------.---------.---------....-540........550....------...560.......570..----------------------------..----------.-----.--------------------.------------580--------.---........590.......--600--.........610...----------------.-...-----620------..---.....630....--...640.......650.....---.------------.660...-..-..670.......680...
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) MLFYKNILTLSILAAISIPVFAAENENVEKLETIRIKAHP-----LEQT----SKDFAVADTVVDQKHLTE-GAAT-IGDALNSEVGIYANQFG-A--G-S--SRPVIRG-QDGP--RVKVLQNSSENVDVSTL---SPDHA--V-----------TVDPV-LAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPT-QIPENGY--EGQVGLRYNTGSD----E-KL-ASAGVTVGL-G--SQVALRIEGLTRD--ANNYIAPNYIHEGEKERRVDNTFAQGDSVNVGL-----------------------------------------------SWVYD-RGYTGISYSNRR-DQYGLPGHSHEYETCH---I------------------HD--LS-LHCGD------HDH-------------EG----HSDEEA----------------------------------------HDHEHEHGGPWID---LKSERYDFKTELNDPF--AGFQKLRAQ-------------------------ASYTDYQHDE--IE---------------------------E----G--TIA-TRFQNKGYDGRIELVH--N-PI--ADWEGVIGTQLGQQKLNLT----G--E------E-----------------------------------------AFMAP-----------------------------------------------TTTKKWS-VFALEHKQWK--D-VHFELSARADQQEI----------------------------------DVD-DN---------------S---KQDFDG--------------SAFSYAGAANWEFAPNYKLSFVASH--QE-RLPLAQELYANGGHFA----TNTYELGNDQLSKEKSNNVELGLHFDN-------D--KLDYHLHVYHNWFDDYIYAQTL------DR------Y------------------K---------D---------FRLV-QY-TQDKARFYGAEGEIG------YQITPMYKISAFGDYVRG----------------------------KI----------D-----A--------------------E------------G----------N---APRIPAGRLGTKVDADFG--D----GFSGSAEYYHVFNQD----------------K-IAA-----YET------ET---EGYNMLNLGVAY--SGQYGAKTDYRVYLKANNLLD---D------------TVYQHAS-FL-SNIPQVGRNFTVGVDFSF
56 HHSearch 67.5843% 47 - C2 - - 4RDR Y964_NEIMB A:[32-748] ---------------------------------------S-----RPRATSGLLHTSTASDKIISGDTLRQ-KAVN-LGDALDGVPGIHASQYG-G--G-A--SAPVIRG-QTGR--RIKVLNHHGETGDMADF---SPDHA--I-----------MVDTA-LSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPE-KMPENGV--SGELGLRLSSGNL----E-KL-TSGGINIGL-G--KNFVLHTEGLYRK--SGDYAVPRYRN----LKRLPDSHADSQTGSIGL-----------------------------------------------SWVGE-KGFIGVAYSDRR-DQYGLPAHSHEYDDCH---A-----------------------D-IIWQKSLINKRYLQLYPHLLTEEDIDYDN----PGLSCG---------------------------------------------HSGRPWID---LRNKRYELRAEWKQPF--PGFEALRVH-------------------------LNRNDYRHDE--KA---------------------------G----D--AVE-NFFNNQTQNARIELRH--Q-PI--GRLKGSWGVQYLQQKSSAL----S--AISEAVKQ-----------------------------------------PMLLD-----------------------------------------------NKVQHYS-FFGVEQANWD--N-FTLEGGVRVEKQKA----------------------------------SIQ-YDKALIDRENYYNHPLPD---LGAHRQ--------------TARSFALSGNWYFTPQHKLSLTASH--QE-RLPSTQELYAHGKHVA----TNTFEVGNKHLNKERSNNIELALGYEG-------D--RWQYNLALYRNRFGNYIYAQTL------ND------G------------------R---------GPKSIEDDSEMKLV-RY-NQSGADFYGAEGEIY------FKPTPRYRIGVSGDYVRG----------------------------RL----------K-----NLPSLPGREDAYGNRPFIAQDD------------Q----------N---APRVPAARLGFHLKASLT--D----RIDANLDYYRVFAQN----------------K-LAR-----YET------RT---PGHHMLNLGANY--RRNTR-YGEWNWYVKADNLLN---Q------------SVYAHSS-FL-SDTPQMGRSFTGGVNVKF
1 PsiBlast_PDB 65.9040% 53 - C2 - - 4RDR Y964_NEIMB A:[32-748] -------------------------------------SRPRATSGLLHT----S---TASDKIISGDTLRQ-KAVN-LGDALDGVPGIHASQYG-G--G-A--SAPVIRG-QTGR--RIKVLNHHGETGDMADF---SPDHA--I-----------MVDTA-LSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPE-KMPENGV--SGELGLRLSSGNL----E-KL-TSGGINIGL-G--KNFVLHTEGLYRK--SGDYAVPRY----RNLKRLPDSHADSQTGSIGL-----------------------------------------------SWVGE-KGFIGVAYSDRR-DQYGLPAHSHEYDDCH---ADIIWQKSLINKRYLQLYPHL--LT-EEDID------YDN-------------PGLSCG--------------------------------------------------HS-GRPWID---LRNKRYELRAEWKQPF--PGFEALRVH-------------------------LNRNDYRHDE--KA---------------------------G----D--AVE-NFFNNQTQNARIELRH--Q-PI--GRLKGSWGVQYLQQKSSAL----SAIS------E-----------------------------------------AVKQPMLLD-------------------------------------------NKVQHYS-FFGVEQANWD--N-FTLEGGVRVEKQKA----------------------------------SIQYDK---------------A---LIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASH--QE-RLPSTQELYAHGKHVA----TNTFEVGNKHLNKERSNNIELALGYEG-------D--RWQYNLALYRNRFGNYIYAQTL------ND------G------------------RGPKSIEDDSE---------MKLV-RY-NQSGADFYGAEGEIY------FKPTPRYRIGVSGDYVRG----------------------------RLKNLPSLPGRED-----A--------------------Y------------GNRPFIAQDDQN---APRVPAARLGFHLKASLT--D----RIDANLDYYRVFAQN----------------K-LAR-----YET------RT---PGHHMLNLGANYRRNTRYG---EWNWYVKADNLLN---Q------------SVYAHSS-FL-SDTPQMGRSFTGGVNVKF
4 PsiBlast_PDB 47.1522% 32 - C2 - - 1NQG BTUB_ECOLI A:[6-594] -------------------------------DTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HGYDVVAYGNTG-TQAQTDNDGFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------YDA---------DTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNYDPH-----------------------------------D--SSA-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
12 PsiBlast_PDB 46.0922% 36 - C2 - - 3M8D BTUB_ECOLI A:[7-594] --------------------------------TLVCTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HGYDVVAYGNTG-TQAQTDNDGFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------YDAYYSPGSPLLDTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNYDPHYGR---------------------------Y----D--SSA-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P-------------------------------------------------------D-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
6 PsiBlast_PDB 45.7622% 36 - C2 - - 1UJW BTUB_ECOLI A:[6-594] -------------------------------DTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HG----------------DNDGFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------YDAYYSPGSPLLDTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNYDPHYGR---------------------------Y----D--SSA-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
5 PsiBlast_PDB 45.4322% 40 - C2 - - 1NQH BTUB_ECOLI A:[6-594] -------------------------------DTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HGYDVVAYGNTG-TQAQTDNDGFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------YDAYYSPGSPLLDTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNYDPHYGR---------------------------Y----D--SSA-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P------------------------------------------------------ED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
2 PsiBlast_PDB 45.3323% 32 - C2 - - 3RGN BTUB_ECOLI A:[6-594] -------------------------------DTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HG-------------------GFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN-----------------------------------------------------TRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNY------------------------------------------SA-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QFGRHG--------------TCQTSAG---WEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
8 PsiBlast_PDB 44.9222% 35 - C2 - - 2YSU - BTUB_ECOLI A:[6-594] -------------------------------DTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HG----------------DNDGFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------YDAYYSPGSPLLDTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNYDPHYGR---------------------------Y----D--SSA-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
11 PsiBlast_PDB 44.8722% 33 - C2 - - 3M8B BTUB_ECOLI A:[6-594] -------------------------------DTLVCTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HG-------------------GFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------------------DTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNY-------------------------------------------A-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
10 PsiBlast_PDB 44.6222% 36 - C2 - - 2GSK BTUB_ECOLI A:[2-590] -------------------------------DTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HGYDVVAYGNTG-TQAQTDNDGFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------YDAYYSPGSPLLDTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNYDPHYGR---------------------------Y----D--SSA-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
3 PsiBlast_PDB 44.1422% 37 - C2 - - 1NQE BTUB_ECOLI A:[6-594] -------------------------------DTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HG-------------------GFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------------------DTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNY-------------------------------------------A-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
13 PsiBlast_PDB 43.7522% 36 - C2 - - 3RGM BTUB_ECOLI A:[7-594] --------------------------------TLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVN-----IIT-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSCQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HG-------------------GFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------------------DTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNY-------------------------------------------A-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
51 Fugue 43.5814% - - C2 - - 3V89 - TBP1_NEIMB A:[51-915] -----------------------RDNEVTGLGKLVKSSDT-----LSKE----Q-------------------VLN-IRDLTRYDPGIAVVEQG-R--GAS--SGYSIRG-MDKN--RVSLTVDGVSQIQSYTA---QAALG--GTRTAGSSGAINEIEYE-NVKAVEISKGSNSVEQGSGALAGSVAFQTKTADDVIGEGRQW--GIQSKTAYSGKNR----G-LT-QSIALAGRI-G--GAEALLIH-TGRR--AGEIRAHEDAGRGVQSFNRLVPVEDSSNYAYFIVKEECKNGSYETCKANPKKDVVGKDERQTVSTRDYTGPNRFLADPLSYESRS-WLFRPGFRFENK-RHYIGGILEHTQQTFD---T------------------RD--MT-VPAFL------TKA-------------VF----DANKKQAGSLPGNGKYAGNHKYGGLFTNGENGALVGAEYGTGVFYDETHTKSRYGLEYV---YTNADKDTWADYARLS--YDRQGVGLDNHFQQTHCSADGSDKYCRPSADKPFSYYKSDRVIY--GE---------------------------S----H--RLL-QAAFKKSFDRHNLSVN--L-GF--DRFGSNLRHQDYYYQHANR----A--Y------S-----------------------------------------SNTPPQNNGKKISPNGSETSPYWVTIGRGNVVTGQICRLGNNTYTDCTPRSINGKSYYA-AVRDNVRLGR--W-ADVGAGLRYDYRST----------------------------------HSD-DG---------------S---VSTGTH--------------RTLSWNAGIVLKPTDWLDLTYRTST--GF-RLPSFAEMYGWRAG---------VQSKAVKIDPEKSFNKEAGIVFKG-------D--FGNLEASWFNNAYRDLIVRGYE------AQIKDGKEE------------------A---------K---------GDPA-YL-NAQSARITGINILGKIDWNGWYSTFAYNRVRVRDIKKRA----------------------------DR----------T-----D--------------------I------------Q----------SHLFDAIQPSRYVVGLGYDQPE--G----KWGVNGMLTYSKAKEITELLGSRALLNGNSRN-TKA-----TAR------RT---RPWYIVDVSGYY--TVKKHFTLRAGVYNLLNYRYV---TWENVRQTAGGAVNQHKNVG-VY-NRYAAPGRNYTFSLEMKF
7 PsiBlast_PDB 42.9922% 39 - C2 - - 2GUF BTUB_ECOLI A:[6-594] -------------------------------DTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDIT----------QLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-H-------------------DGFLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------Y-----------DTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNYDPHYGR---------------------------Y----D--SSA-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDWQKQTTT----P--G------T-----------------------------------------GYVED-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDWGITYQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDY-----------------------------AGREYTLSGSYTF
9 PsiBlast_PDB 41.4522% 34 - C2 - - 1NQF BTUB_ECOLI A:[7-594] --------------------------------TLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDR-WQSTSVNDVLRRLPGVDITQNG-G--S-GQLSSIFIRG-TNAS--HVLVLIDGVR-LNLAGV---SGSAD--L-----------SQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----T-TRDEPGT--E-------------------------ISAGW-G--SN----------S--YQNYDVSTQQQLGDKTR-----------VTLLG-----------------------------------------------DYAHT-HG--------------------FLSKTLYGALE------------------HN--FTDAWSGF------VRG-------------YG----YDNRTN----------------------------------------------------DTRKLYSQSWDAGLRYNGEL--IKSQLITSY-------------------------SHSKDYNY-------------------------------------------A-TLDEMKQY--TVQWAN--N-VI--VG-HGSIGAGVDMQMQMTT----P--G------T-----------------------------------------G---D-----------------------------------------------GYDQRNTGIYLTGLQQVG--D-FTFEGAARSD------------------------------------------DN---------------S---QF---G--------------RHGTWQTSAGWEFIEGYR--FIASYGTSY-KAPNLGQLY---GFY-----------GNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLI------------D------Y------------------D---------D---------HTLK-YY-NEGKARIKGVEATAN------FDTGPLTHTVSY-DYVDA----------------------------R-----------N-----A--------------------I------------T----------D---TPLLRRAKQQVKYQLDWQLYD----FDMGMTMQYLGTRYD----------------KDYSS-----YPY------QTVKMGGVSLWDLAVAY--P----VTSHLTVRGKIANLFDKDYE------------TVYGYQT---------AGREYTLSGSYTF
57 HHSearch 40.7718% 42 - C2 - - 3FHH ? A:[2-640] -------------------------------ETMTVTATG-----NARS----SFEAPMMVSVIDTSAPENQTATS-ATDLLRHVPGITLDGTG-RT-N-G--QDINMRG-YDHR--GVLVLVDGIRQGTDTG----HLN-G--T-----------FLDPA-LIKRVEIVRGPSALLYGSGALGGVISYDTVDAKD-L-LQEGQSSGFRVFGTGGTGDH----S-LG-LGASAFGR--T--ENLDGIVAWSSRD--RGDLRQSNGE-------T-APNDESINNMLAKG-----------------------------------------------TWQIDSAQSLSGLVRYYN-NDAREPKNPQTVEA-S---E---------------------------------------------------------------S-----------------------------------------------SNPMVD---RSTIQRDAQLSYKLAPQGNDWLNADAK-------------------------IYWSEVRINA--Q-------------------------------------EY-REQITKGARLENRSTLFAD-SF--ASHLLTYGGEYYRQEQGSH---------------T----------------------------------------TGFPQ-----------------------------------------------AKIDFSS-GWLQDEITLRDLP-ITLLGGTRYDSYRG----------------------------------SSD-GY--------------------KDVDA--------------DKWSSRAGMTINPTNWLMLFGSYAQ--AF-RAPTMGEMYNDSKHFSIGRFYTNYWVPNPNLRPETNETQEYGFGLRFDDLMLSND--ALEFKASYFDTKAKDYISTTVD------FA-----------------------------------A---------ATTM-SY-NVPNAKIWGWDVMTK------YTT-DLFSLDVAYNRTRG----------------------------KD----------TD----T--------------------G------------E----------Y---ISSINPDTVTSTLNIPIAH-S----GFSVGWVGTFADRST----------------H-ISS--------------KQ---PGYGVNDFYVSY--QGQQA-LKGMTTTLVLGNAFD---K------------EYWSPQ------GIPQDGRNGKIFVSYQW
75 HHSearch 39.5916% 37 - C2 - - 2HDI CIRA_ECOLI A:[7-639] -------------------------------ETMVVTASS-----VEQN----LKDAPASISVITQEDLQRKPVQN-LKDVLKEVPGVQLTNEG-D--N-R--KGVSIRG-LDSS--YTLILVDGKRVNSRNAVFRHNDFDL--N-----------WIPVD-SIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQ--KW------SGTVTVDTTIQEHRDRGDTYN-GQFFTSGPLID--GVLGMKAYGSLAKREKDD------------------EGFSSRDGNVEF-----------------------------------------------AWTPNQNHDFTAGYGFDR-QDRDS------------------------------------------------------------------------------------------------------------------------------N--RLE---RQNYSVSHNGRWDYG-------TSELK-------------------------YYGEKVENKN-------------------------------P----G--N-S-SPITSESNTVDGKYTL--PLTA--INQFLTVGGEMRHDKMSDA----V--NLT----G-----------------------------------------GTSSK-----------------------------------------------TSASQYA-LFVEDEWRIFE-P-LALTTGVRMDDHET---------------------------------------------------------------YG--------------EHWSPRAYLVYNATDTVTVKGGWAT--AF-KAPSLLQLSPDWTSNSCR--GACKIVGSPDLKPETSESWELGLYYMGEEGWL--E--GVESSVTVFRNDVKDRISISRT------SD------VNAAPGYQNFVGFETGANGR---------R---------IPVFSYY-NVNKARIQGVETELK------IPFNDEWKLSINYTYNDG----------------------------RD----------VSNG--E--------------------N------------K----------P---LSDLPFHTANGTLDWKPLALE----DWSMYMSGHYTGQK-----------------------------------------GGYTIWNTGAAW--QVT----KDVKLRAGVLNLGD---K------------DLSR----------NEDGRRYFMAVDYRF
69 HHSearch 39.3116% 42 - C2 - - 1FI1 FHUA_ECOLI A:[7-707] --------------------------AATIAARQSATGTK-----TDTP----IQKVPQSISVVTAEEMALHQPKS-VKEALSYTPGVSVGTRG-ASNT-Y--DHLIIRG-FAAEGQSQNNYLNGLKLQGNFY-------ND--A-----------VIDPY-MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTT--EP------LKEVQFKAG--TD----S-LFQTGFDFSDSL-DDDGVYSYRLTGLARS--ANAQQKG--------------SEEQRYAIAPAF-----------------------------------------------TWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVE---P------------------LPNGKR-LPTDF------N-------------------------EG----------------------------------------------AKNNTYS---RNEKMVGYSFDHE--F--NDTFTVRQN-------------------------LRFAENKTSQ--NSVYGYGVCSDPANAYSKQCAALAPADKGHYLARK--YVV-DDEKLQNFSVDTQLQS--KFATGDIDHTLLTGVDFMRMRNDIN----A--W------FGYDDSVPLLNLYNPSSHHHHHHGSSVNTDFDFNAKDPANSGPYRIL-----------------------------------------------NKQKQTG-VYVQDQAQWD--K-VLVTLGGRYDWADQ----------------------------------ESL-NR---------------VAGTTDKRDD--------------KQFTWRGGVNYLFDNGVTPYFSYSE--SF-EPSSQVGK-----------------DGNI-FAPSKGKQYEVGVKYVP-------EDRPIVVTGAVYNLTKTNNLMADPE------G-----------------------------------------------SFF-SV-EGGEIRARGVEIEAK------AALSASVNVVGSYTYTDA----------------------------EY----------TTDTTYK--------------------G------------N----------T---PAQVPKHMASLWADYTFF--DGPLSGLTLGTGGRYTGSSY----------------G-DPA-----NSF------KV---GSYTVVDALVRY--DLARVGMAGSNVALHVNNLFD---R------------EYVASCF-NTYGCFWGAERQVVATATFRF
66 HHSearch 38.6620% 35 - C2 - - 2GSK BTUB_ECOLI A:[1-590] ------------------------------PDTLVVTANR-----FEQP----RSTVLAPTTVVTRQDIDRWQSTS-VNDVLRRLPGVDITQNG-GS-GQL--SSIFIRG-TNAS--HVLVLIDGVRLNLAGVS---GSADL--S-----------QFPIA-LVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEP------G----TEISAGWG--SN----S-YQNYDVSTQQQL-G--DKTRVTLLGDYAH--THGYDVVAYGNTG-TQAQTDNDGFLSKTLYGAL-----------------------------------------------EHNFTDAWSGFVRGYGYD-NRTNYDAYYSPGSP------------------------L-----------------------------------------------------------------------------------------L--DTR--K---LYSQSWDAGLRYNGEL--I---KSQLI-------------------------TSYSHSKDYN--YDPH-------------------------Y----GRYDSSATLDEMKQYTVQWANNV----IV--GHGSIGAGVDWQKQTTTPG----T---------G-----------------------------------------YVEDG-----------------------------------------------YDQRNTG-IYLTGLQQVG--D-FTFEGAARSDDNSQ---------------------------------------------------------------FG--------------RHGTWQTSAGWEFIEGYRFIASYGT--SY-KAPNLGQLYGF--------------YGNPNLDPEKSKQWEGAFEGLT-------A--GVNWRISGYRNDVSDLIDYDDH------T------------------------------------------------LK-YY-NEGKARIKGVEATAN------FDTG-PLTHTVSYDYVDA----------------------------RN----------AI----T--------------------D------------T----------P---LLRRAKQQVKYQLDWQL---Y----DFDWGITYQYLGTRY----------------D-KDYSSYPYQTV------KM---GGVSLWDLAVAY--PVT----SHLTVRGKIANLFD---K------------DYETVY------GYQTAGREYTLSGSYTF
49 Fugue 38.0816% 35 - C2 - - 3CSL ? A:[113-865] ----------------------------------------------NDW----VYDEPRSVSVISREQMDN-RPARHAADILEQTTGAYSSVSQQD--P-A--LSVNIRGIQDYG--RVNMNIDGMRQNFQKSG---HGQRNGTM-----------YIDSE-LLSGVTIDKGTTGGMGSAGTLGGIATFNTVSASD-FLAPGKE--LGGKLHASTGDNG----T-HF-IGSGILALG-N--ETGDILLAASERH--LGDYWPGNKGDIGNIRINNDTGNYDRYAESIKN-----------------------------------------------NKIPD-THYRMHSRLAKV-GWNLPANQRLQLSYLQ---T------------------QT--AS-PIAGT------LTN-------------LG----TRPPYE----------------------------------------LGWKRTG---YTD---VMARNAAFDYSLAPED--VDWLDFQAK-------------------------LYYVDTQDDS--DTYSTSSLLDNGY----------------A----T--RTR-LRTYGAQAQNTSRFSL--A-PG--HDFRANYGLEFYYDKATSDSSRQG--M------E-----------------------------------------GVTPA-----------------------------------------------GNRSVAS-LFANLTYDYD--GWLTLEGGLRYDRYRLRGQTGLSYPDLAKDGQRYTIDNPCKALRLTGCSTTTR-ED---------------W---DVDRDQ--------------GKLSPTLAVAVRPGVEWLELYTTYG--KSWRPPAITETLTNGSAHS----SSTQYP-NPFLQPERSRAWEVGFNVQQPDLWFEGD--RLVAKVAYFDTKVDNYINLAIDRNKPGLVQ------P------------------S---------I---------GNAA-YVNNLSKTRFRGLEYQLN------YDAGVFYADLTYTHMIGKNEFCSNKAWLGGRLRYGDGSRRGNFYVEPD----------A-----A--------------------SNDFVTCDGGTQFG----------S---AAYLPGDRGSVTLGGRAF--D----RKLDAGVTVRFAPGY----------------Q-DSS-----VPSNYPYLADW---PKYTLFDLYASY--KLTDSLTLRGSVE----NLTN---R------------AYVVSYGETL-ANTLGRGRTVQGGVEYRF