@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VS25: (2017-12-05 )
MNILIVHAHPEPLSFTTSLKTTAQQTFKKLGHQVVISDLYAMQFNPLASKEDFLELNQPDYFNYALEQRNATKQQLLSPDIQAEIDKVKRADLIILNFPLYWTSVPAILKGWIDRVFVSGLFYGGKRFYNHGGMAGKKAMLCLTLGGRTHMFGENSIHGPIEHYLSPIQRGTLAYTGFEVLPPFIAYHVPYISQEARETILEDYVTYLTHLDQLEPLKFPKLEEFDEKLYPL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_B_5(4QOF)
NQO2_HUMAN
[Raw transfer]




FMN_B_6(4QOI)
NQO2_HUMAN
[Raw transfer]




ML1_B_7(2QX4)
NQO2_HUMAN
[Raw transfer]




ML1_B_7(4QOG)
NQO2_HUMAN
[Raw transfer]




A7B_A_5(3NHY)
NQO2_HUMAN
[Raw transfer]




LDP_B_8(2QMZ)
NQO2_HUMAN
[Raw transfer]




AA_A_7(3TZB)
NQO2_HUMAN
[Raw transfer]




PEG_B_6(3HA2)
?
[Raw transfer]




LDP_A_6(2QMZ)
NQO2_HUMAN
[Raw transfer]




GOL_A_6(4QOD)
NQO2_HUMAN
[Raw transfer]




GOL_A_3(4QOD)
NQO2_HUMAN
[Raw transfer]




GOL_B_8(4QOD)
NQO2_HUMAN
[Raw transfer]




2 PsiBlast_PDB 85.2742% -78 - C1 -1QR2 - NQO2_HUMAN -
37 PsiBlast_CBE 84.9842% -80 - C1 -4U7F - NQO2_HUMAN -
84 PsiBlast_CBE 84.9642% -89 - C1 -4QOH - NQO2_HUMAN -
3 PsiBlast_PDB 84.7642% -79 - C1 -2QR2 - NQO2_HUMAN -
81 PsiBlast_CBE 84.7142% -85 - C1 -4QOI 8.9 NQO2_HUMAN
61 PsiBlast_CBE 84.5542% -85 - C1 -2QX9 - NQO2_HUMAN -
36 PsiBlast_CBE 84.3742% -87 - C1 -4U7F - NQO2_HUMAN -
87 PsiBlast_CBE 84.1942% -83 - C1 -4QOF 9.0 NQO2_HUMAN
64 PsiBlast_CBE 84.0442% -82 - C1 -2QX4 - NQO2_HUMAN -
34 PsiBlast_CBE 84.0242% -84 - C1 -4U7G - NQO2_HUMAN -
59 PsiBlast_CBE 84.0142% -83 - C1 -3NHF - NQO2_HUMAN -
21 PsiBlast_CBE 83.9442% -82 - C1 -3O73 - NQO2_HUMAN -
70 PsiBlast_CBE 83.8742% -88 - C1 -1QR2 - NQO2_HUMAN -
50 PsiBlast_CBE 83.6342% -84 - C1 -3NHW - NQO2_HUMAN -
90 PsiBlast_CBE 83.5942% -85 - C1 -4QOE - NQO2_HUMAN -
56 PsiBlast_CBE 83.5942% -86 - C1 -3NHL - NQO2_HUMAN -
91 PsiBlast_CBE 83.5742% -85 - C1 -4QOD 3.1 NQO2_HUMAN
24 PsiBlast_CBE 83.5742% -84 - C1 -4ZVN - NQO2_HUMAN -
75 PsiBlast_CBE 83.4642% -84 - C1 -4XDH - NQO2_HUMAN -
47 PsiBlast_CBE 83.4642% -88 - C1 -3NHY - NQO2_HUMAN -
92 PsiBlast_CBE 80.0542% -83 - C1 -4QOD 2.1 NQO2_HUMAN