@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : STAP1_HUMAN: (2017-06-04 )
CFYTVSRKEATEMLQKNPSLGNMILRPGSDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDYF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(3MAZ)

[Raw transfer]

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1 PsiBlast_PDB 98.54100%-181 - C2 -3MAZ 9.1
2 PsiBlast_PDB 64.5239% -31 - C2 -2EL8 - -
72 Fugue 62.1440% -15 - C2 -2EL8 Calc...
71 HHSearch 52.3825% -28 - C2 -3US4 Calc...
3 PsiBlast_PDB 49.0928%-123 - C2 -2EOB - -
67 HHSearch 49.0122% -4 - C2 -2CRH Calc...
70 HHSearch 48.1722% -4 * C2 *2CIA Calc...
60 HHSearch 47.4822% -11 - C- -3EAZ - CSK_HUMAN -
62 HHSearch 46.3616% -61 - C2 -2Y3A Calc...
54 HHSearch 44.5922% -38 - C2 -2OZO Calc... ZAP70_HUMAN
69 HHSearch 44.3120% -8 - C2 -4FL3 Calc... KSYK_HUMAN
64 HHSearch 44.2916% -17 - C2 -2MK2 Calc... SHIP2_HUMAN
68 HHSearch 44.2026% -0 - C2 -1RJA Calc... PTK6_HUMAN
55 HHSearch 42.3122% 32 - C2 -1JU5 Calc... CRK_HUMAN
61 HHSearch 42.2518% -23 - C2 -1KA6 Calc... SH21A_HUMAN
65 HHSearch 42.0119% 18 - C2 -3PS5 Calc... PTN6_HUMAN
59 HHSearch 41.5321% -2 - C2 -2IUG Calc...
77 Fugue 41.2516% -37 - C2 -3GXW Calc... SPT6_CANGA
58 HHSearch 41.2519% 19 - C2 -2LNW Calc...
73 Fugue 41.2427% 37 - C2 -2PLD Calc...