@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0638: (2017-12-26 )
MTYLPVALTIAGTDPSGGAGIMADLKSFQARDVYGMAVVTSLVAQNTRGVQLIEHVSPQMLKAQLESIFSDIPPQAVKTGMLATTEIMEIIQPYLKKLDCPYVLDPVMVATSGDALIDSSARDYLKTNLLPLATIITPNLPEAEEIVGFSIHDPEDMQRAGRLILKEFGPQSVVIKGGHLKGGAKDFLFTKNEQFVWESPRIQTCHTHGTGCTFAAVITAELAKGKSLYQAVDKAKAFITKAIQDAPQLGHGSGPVNHTTFKD

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_H_8(2I5B)
PDXK_BACSU
[Raw transfer]



ACP_D_16(4C5N)
?
[Raw transfer]



ACP_B_8(4C5N)
?
[Raw transfer]



PLP_A_2(4YWR)
?
[Raw transfer]



HMH_H_8(1JXI)
THID_SALTY
[Raw transfer]



PLP_A_2(4YWR)
?
[Raw transfer]



HMH_H_8(1JXI)
THID_SALTY
[Raw transfer]



UEG_D_15(4C5N)
?
[Raw transfer]



UEG_D_11(4C5L)
?
[Raw transfer]



UEG_A_5(4C5L)
?
[Raw transfer]



UEG_C_10(4C5L)
?
[Raw transfer]



EDO_A_3(4YL5)
?
[Raw transfer]



PXL_A_5(4C5N)
?
[Raw transfer]



ADP_I_9(2I5B)
PDXK_BACSU
[Raw transfer]



PXL_C_11(4C5N)
?
[Raw transfer]



PXL_B_7(4C5N)
?
[Raw transfer]



EDO_A_2(4YL5)
?
[Raw transfer]
1 PsiBlast_PDB 83.1750% -56 - C1 -4JJP - ? -
70 HHSearch 82.2546% -34 - C1 -1UB0 - ? -
80 HHSearch 81.3149% -49 - C1 -4JJP - ? -
79 HHSearch 81.2849% -59 - C1 -4JJP - ? -
5 PsiBlast_PDB 81.2145% -50 - C1 -1UB0 - ? -
21 PsiBlast_CBE 81.1150% -63 - C1 -4JJP - ? -
75 HHSearch 78.6445% -54 - C1 -1JXI 3.6 THID_SALTY
74 HHSearch 76.9645% -54 - C1 -1JXH - THID_SALTY -
22 PsiBlast_CBE 76.7344% -58 - C1 -1JXI 3.6 THID_SALTY
89 HHSearch 76.5535% -54 - C1 -3RM5 - THI20_YEAST -
3 PsiBlast_PDB 76.3144% -56 - C1 -1JXI - THID_SALTY -
60 Fugue 75.8842% -62 - C1 -1JXH - THID_SALTY -
2 PsiBlast_PDB 75.1644% -57 - C1 -1JXH - THID_SALTY -
13 PsiBlast_PDB 74.7734% -38 - C1 -3RM5 - THI20_YEAST -
25 PsiBlast_CBE 73.2041% -3 - C1 -2I5B 6.1 PDXK_BACSU
73 HHSearch 73.0234% -51 - C1 -4YWR 3.7 ?
12 PsiBlast_PDB 72.7134% -74 - C1 -4YWR 3.7 ?
4 PsiBlast_PDB 72.6841% -2 - C1 -2I5B - PDXK_BACSU -
86 HHSearch 72.4242% 4 - C1 -2I5B - PDXK_BACSU -
7 PsiBlast_PDB 72.1638% -7 - C1 -4C5K - ? -
26 PsiBlast_CBE 72.1141% -1 - C1 -2I5B 5.1 PDXK_BACSU
35 PsiBlast_CBE 71.6838% -3 - C1 -4C5L 2.7 ?
30 PsiBlast_CBE 71.3438% -5 - C1 -4C5N 6.4 ?
11 PsiBlast_PDB 70.5634% -69 - C1 -4YL5 3.9 ?
34 PsiBlast_CBE 70.4838% -5 - C1 -4C5L 2.5 ?
28 PsiBlast_CBE 69.8538% -7 - C1 -4C5N 5.6 ?
8 PsiBlast_PDB 69.4638% -7 - C1 -4C5L 2.8 ?
10 PsiBlast_PDB 68.3638% -2 - C1 -4C5N 2.7 ?
29 PsiBlast_CBE 67.9438% 2 - C1 -4C5N 2.7 ?