@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0690: (2017-12-27 )
MKLKKEKKMAEFTFEIEEHLLTLSENEKGWTKEINRVSFNGAPAKFDIRAWSPDHTKMGKGITLSNEEFQTMVDAFKGN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DT_A_4(4G06)
?
[Raw transfer]




DT_A_4(4G06)
?
[Raw transfer]




PEG_B_6(3OBH)
?
[Raw transfer]




CIT_A_4(3OBH)
?
[Raw transfer]




CIT_A_4(3OBH)
?
[Raw transfer]




CIT_A_4(3OBH)
?
[Raw transfer]




NACID_C_3(2LTT)
?
[Raw transfer]

-

NACID_C_3(2LTT)
?
[Raw transfer]

-

11 HHSearch 84.51100% -23 - C2 -4G06 3.0 ?
3 PsiBlast_PDB 83.9597% -23 - C2 -4G06 3.0 ?
12 HHSearch 81.98100% -13 - C2 -3OBH 3.3 ?
2 PsiBlast_PDB 81.0895% -13 - C2 -3OBH 3.3 ?
9 PsiBlast_CBE 80.6195% -11 - C2 -3OBH 3.0 ?
1 PsiBlast_PDB 77.33100% -25 - C2 -2L3A - ? -
13 HHSearch 76.89100% 7 - C2 -2L3A - ? -
31 Fugue 74.1190% 14 - C2 -3OBH 3.3 ?
6 PsiBlast_PDB 69.1356% -17 - C2 -3PM7 - ? -
4 PsiBlast_PDB 66.8066% 11 - C2 -2LTD - ? -
5 PsiBlast_PDB 64.6466% 1 - C2 -2LTT 10.8 ?
10 PsiBlast_CBE 64.4866% 7 - C2 -2LTT 10.9 ?
28 HHSearch 49.450%-204 - C- -3EYE - ? -
21 HHSearch 41.2418%-109 - C2 -5T5D - ? -
38 Fugue 39.7737% 6 - C2 -1FSV - ? -
25 HHSearch 38.060%-157 * C2 *2JZN - ? -
15 HHSearch 37.8523% 29 - C2 -1PCF - TCP4_HUMAN -
24 HHSearch 37.634% -97 - C2 -1BLE - PTFB_BACSU -
39 Fugue 37.3517% -9 - C3 -5J0K - ? -
36 Fugue 36.8626% 172 - C2 -2N3Z - ? -