@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0793: (2017-12-29 )
MNKSEHRHQLIRALITKNKIHTQAELQALLAKNDIQVTQATLSRDIKNMNLSKVREEDSAYYVLNNGSISKWEKRLELYMEDALVWMRPVQHQVLLKTLPGLAQSFGSIIDTLSFPDAIATLCGNDVCLIICEDADTAQKCFEELKKFAPPFFFEE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ARG_A_13(3FHZ)
ARGR_MYCTU
[Raw transfer]




GGB_F_26(3LAP)
ARGR_MYCTU
[Raw transfer]




ARG_B_14(3FHZ)
ARGR_MYCTU
[Raw transfer]




GGB_D_22(3LAP)
ARGR_MYCTU
[Raw transfer]




GGB_E_25(3LAP)
ARGR_MYCTU
[Raw transfer]




ARG_C_15(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_E_17(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_D_16(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_F_18(3FHZ)
ARGR_MYCTU
[Raw transfer]




ARG_F_11(1B4B)

[Raw transfer]




ARG_D_7(1B4B)
ARGR_GEOSE
[Raw transfer]




TYR_B_5(5JVO)
?
[Raw transfer]




2 PsiBlast_PDB 78.2936%-101 - C7 -1B4A - ARGR_GEOSE -
1 PsiBlast_PDB 78.2639%-103 - C7 -1F9N - ARGR_BACSU -
27 PsiBlast_CBE 77.6231% -61 - C7 -3LAJ - ARGR_MYCTU -
26 PsiBlast_CBE 77.2731% -60 - C7 -3LAJ - ARGR_MYCTU -
28 PsiBlast_CBE 77.2331% -60 - C7 -3LAJ - ARGR_MYCTU -
31 PsiBlast_CBE 77.0431% -64 - C7 -3FHZ 2.4 ARGR_MYCTU
32 PsiBlast_CBE 76.7131% -64 - C7 -3FHZ 2.4 ARGR_MYCTU
21 PsiBlast_CBE 76.2531% -55 - C7 -3LAP - ARGR_MYCTU -
23 PsiBlast_CBE 76.1431% -53 - C7 -3LAP - ARGR_MYCTU -
22 PsiBlast_CBE 75.9931% -55 - C7 -3LAP - ARGR_MYCTU -
24 PsiBlast_CBE 75.7931% -63 - C7 -3LAP 2.6 ARGR_MYCTU
25 PsiBlast_CBE 75.6131% -63 - C7 -3LAP 2.3 ARGR_MYCTU
7 PsiBlast_PDB 75.5531% -64 - C7 -3LAP 2.6 ARGR_MYCTU
35 PsiBlast_CBE 75.4531% -59 - C7 -3FHZ 2.4 ARGR_MYCTU
33 PsiBlast_CBE 75.3931% -57 - C7 -3FHZ 2.4 ARGR_MYCTU
4 PsiBlast_PDB 75.3931% -36 - C7 -3ERE - ARGR_MYCTU -
5 PsiBlast_PDB 75.3531% -64 - C7 -3FHZ 2.4 ARGR_MYCTU
34 PsiBlast_CBE 75.2731% -58 - C7 -3FHZ 2.4 ARGR_MYCTU
3 PsiBlast_PDB 75.2638%-116 - C7 -5CJ9 - ARGR_BACHD -
30 PsiBlast_CBE 73.8031% -53 - C7 -3LAJ - ARGR_MYCTU -
52 HHSearch 59.2731%-237 - C7 -1B4B 3.4
74 Fugue 57.3534%-181 * C7 *1B4B 3.2 ARGR_GEOSE