@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1235: (2018-01-08 )
MKLIVSVMPRSLEEAQALDATRYLDADIIEWRADYLPKEAILQVAPAIFEKFAGRELVFTLRTRSEGGEIDLSPEEYIHLIKEVAQLYQPDYIDFEYYSYKDVFEEMLDFPNLVLSYHNFQETPENMMEILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQEYVTISMGKVGKVSRITADVTGSSWSFASLDEVSAPGQISLASMKKIREILDEA

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(3LB0)
AROD_SALTY
[Raw transfer]



CIT_B_8(4CNN)
AROD_SALTI
[Raw transfer]



DQA_B_4(3NNT)
AROD_SALTY
[Raw transfer]



SKM_A_3(4GUJ)
AROD_SALTY
[Raw transfer]



DQA_A_3(3NNT)
AROD_SALTY
[Raw transfer]



QIC_A_3(4GUI)
AROD_SALTY
[Raw transfer]



QIC_A_3(4IUO)
AROD_SALTY
[Raw transfer]



QIC_B_4(4IUO)
AROD_SALTY
[Raw transfer]



3DS_A_4(4GUG)
AROD_SALTY
[Raw transfer]



SKM_B_7(4GUJ)
AROD_SALTY
[Raw transfer]



QIC_B_6(4GUI)
AROD_SALTY
[Raw transfer]



DHS_E_5(1L9W)
AROD_SALTI
[Raw transfer]



GOL_A_5(2OX1)
AROD_ARCFU
[Raw transfer]



3DS_A_3(4GUH)
AROD_SALTY
[Raw transfer]



3DS_B_5(4GUG)
AROD_SALTY
[Raw transfer]



DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]



DHS_B_4(1QFE)
AROD_SALTI
[Raw transfer]



3DS_B_5(4GUH)
AROD_SALTY
[Raw transfer]



DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]



DHS_C_7(3JS3)
AROD_PEPD6
[Raw transfer]



DHS_D_8(3JS3)
AROD_PEPD6
[Raw transfer]



DHS_A_5(3JS3)
AROD_PEPD6
[Raw transfer]



MLA_A_10(3S42)
AROD_SALTY
[Raw transfer]



MLA_B_3(3S42)
AROD_SALTY
[Raw transfer]



DHS_B_6(3JS3)
AROD_PEPD6
[Raw transfer]



BO3_A_13(3S42)
AROD_SALTY
[Raw transfer]



SHL_B_9(4H3D)
AROD_PEPD6
[Raw transfer]



SHL_D_13(4H3D)
AROD_PEPD6
[Raw transfer]



SHL_A_7(4H3D)
AROD_PEPD6
[Raw transfer]



SHL_B_9(4H3D)
AROD_PEPD6
[Raw transfer]



SHL_C_12(4H3D)
AROD_PEPD6
[Raw transfer]



EDO_A_5(2OCZ)
AROD_STRP1
[Raw transfer]



EDO_A_5(2OCZ)
AROD_STRP1
[Raw transfer]



SIN_B_9(4GFS)
AROD_SALTY
[Raw transfer]



PEG_A_6(4H3D)
AROD_PEPD6
[Raw transfer]
1 PsiBlast_PDB 84.8268%-132 - C5 -3L9C - AROD_STRMU -
2 PsiBlast_PDB 80.0661%-121 - C5 -2OCZ 2.4 AROD_STRP1
49 HHSearch 77.6768% -32 - C5 -3L9C - AROD_STRMU -
50 HHSearch 75.4764% -31 - C5 -2OCZ 2.4 AROD_STRP1
18 PsiBlast_PDB 61.0430% -12 - C5 -1L9W 4.0 AROD_SALTI
19 PsiBlast_PDB 60.9130% -1 - C5 -1GQN - AROD_SALTI -
16 PsiBlast_PDB 60.8432% -4 - C5 -4IUO 4.6 AROD_SALTY
38 PsiBlast_CBE 60.6032% -8 - C5 -4IUO 4.2 AROD_SALTY
25 PsiBlast_CBE 60.5633% -4 - C5 -4GFS 3.5 AROD_SALTY
5 PsiBlast_PDB 60.3933% -1 - C5 -3S42 2.9 AROD_SALTY
10 PsiBlast_PDB 60.2433% -5 - C5 -4GUJ 5.7 AROD_SALTY
21 PsiBlast_CBE 60.1033% -7 - C5 -3S42 2.8 AROD_SALTY
23 PsiBlast_CBE 60.0933% -5 - C5 -4GUJ 3.3 AROD_SALTY
32 PsiBlast_CBE 60.0033% -7 - C5 -3M7W - AROD_SALTY -
15 PsiBlast_PDB 59.9332% -5 - C5 -3NNT 5.3 AROD_SALTY
39 PsiBlast_CBE 59.8632% -8 - C5 -3NNT 4.8 AROD_SALTY
33 PsiBlast_CBE 59.8633% -7 - C5 -3M7W - AROD_SALTY -
30 PsiBlast_CBE 59.7433% -9 - C5 -3M7W - AROD_SALTY -
17 PsiBlast_PDB 59.6630% -12 - C5 -1QFE 4.4 AROD_SALTI
14 PsiBlast_PDB 59.5732% -8 - C5 -3O1N - AROD_SALTY -
12 PsiBlast_PDB 59.5332% -4 - C5 -4GUG 3.1 AROD_SALTY
4 PsiBlast_PDB 59.4833% -7 - C5 -3LB0 3.8 AROD_SALTY
34 PsiBlast_CBE 59.2532% -6 - C5 -4GUH 4.8 AROD_SALTY
9 PsiBlast_PDB 59.1033% -2 - C5 -4GUI 5.1 AROD_SALTY
13 PsiBlast_PDB 58.6332% -6 - C5 -4GUH 4.6 AROD_SALTY
52 HHSearch 58.4232% -6 - C5 -4CNN 4.7 AROD_SALTI
53 HHSearch 58.3530% 2 - C5 -4H3D 3.1 AROD_PEPD6
70 Fugue 58.2331% -17 * C5 *1QFE 4.4 AROD_SALTI
24 PsiBlast_CBE 58.1633% -4 - C5 -4GUI 3.8 AROD_SALTY
35 PsiBlast_CBE 57.8132% -17 - C5 -4GUG 4.6 AROD_SALTY
51 HHSearch 57.7632% -3 - C5 -1QFE 4.6 AROD_SALTI
44 PsiBlast_CBE 57.0932% 6 - C5 -3JS3 3.9 AROD_PEPD6
46 PsiBlast_CBE 56.3032% 11 - C5 -3JS3 4.1 AROD_PEPD6
42 PsiBlast_CBE 56.1732% 11 - C5 -4H3D 3.0 AROD_PEPD6
41 PsiBlast_CBE 56.1232% 4 - C5 -4H3D 2.9 AROD_PEPD6
45 PsiBlast_CBE 56.0832% 11 - C5 -3JS3 4.7 AROD_PEPD6
47 PsiBlast_CBE 56.0632% 16 - C5 -3JS3 3.5 AROD_PEPD6
40 PsiBlast_CBE 55.9432% 9 - C5 -4H3D 3.2 AROD_PEPD6
43 PsiBlast_CBE 55.7532% 1 - C5 -4H3D 2.9 AROD_PEPD6