@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1540: (2018-01-14 )
MKASPHRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQDDVDGFCVSNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGLTVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVCVEGIFTHFATADEESDDYFNAQLERFKTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALTLESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFSVLVDGQACPIVGRVSMDQITIRLPKLYPLGTKVTLIGSNGDKEITATQVATYRVTINYEVVCLLSDRIPREYY

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BME_A_5(3OO2)
ALR1_STAAC
[Raw transfer]



DCS_C_6(3E6E)
?
[Raw transfer]



IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_B_4(1BD0)
ALR_GEOSE
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



DCS_B_5(3E6E)
?
[Raw transfer]



DCS_A_4(3E6E)
?
[Raw transfer]



PLP_B_7(3E5P)
?
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



UAH_A_4(5IRP)
ALR2_BACSU
[Raw transfer]



PLP_C_10(3E5P)
?
[Raw transfer]



PLP_C_10(3E5P)
?
[Raw transfer]



IN5_A_3(1BD0)
ALR_GEOSE
[Raw transfer]



UAH_B_23(5IRP)
ALR2_BACSU
[Raw transfer]



UAH_B_23(5IRP)
ALR2_BACSU
[Raw transfer]



DCS_A_3(4LUT)
?
[Raw transfer]



PLP_A_4(3E5P)
?
[Raw transfer]



PLP_A_5(1SFT)
ALR_GEOSE
[Raw transfer]



PLP_B_6(1SFT)
ALR_GEOSE
[Raw transfer]



PLP_A_3(4A3Q)
ALR1_STAAM
[Raw transfer]



PLP_B_11(4A3Q)
ALR1_STAAM
[Raw transfer]



PLP_B_11(4A3Q)
ALR1_STAAM
[Raw transfer]



TRS_B_24(5IRP)
ALR2_BACSU
[Raw transfer]



TRS_A_5(5IRP)
ALR2_BACSU
[Raw transfer]



CO2_B_21(5IRP)
ALR2_BACSU
[Raw transfer]



CO2_B_25(5IRP)
ALR2_BACSU
[Raw transfer]



ALA_B_6(4Y2W)
ALR1_CALS4
[Raw transfer]



ALA_B_6(4Y2W)
ALR1_CALS4
[Raw transfer]



ALA_A_4(4Y2W)
ALR1_CALS4
[Raw transfer]
7 PsiBlast_PDB 89.5343% -60 - C2 -3UW6 - ALR_GEOSE -
3 PsiBlast_PDB 85.2046% -36 - C2 -1SFT 4.2 ALR_GEOSE
26 PsiBlast_CBE 84.8746% -37 - C2 -1BD0 7.7 ALR_GEOSE
25 PsiBlast_CBE 84.6846% -34 - C2 -1SFT 5.6 ALR_GEOSE
6 PsiBlast_PDB 84.2543% -66 - C2 -4ILS - ALR_GEOSE -
2 PsiBlast_PDB 84.1552% -26 - C2 -3E6E 6.0 ?
24 PsiBlast_CBE 83.9752% -23 - C2 -3E5P 3.5 ?
4 PsiBlast_PDB 83.9246% -36 - C2 -1BD0 7.4 ALR_GEOSE
62 HHSearch 83.6446% -35 - C2 -1BD0 7.7 ALR_GEOSE
22 PsiBlast_CBE 83.2852% -25 - C2 -3E6E 5.5 ?
23 PsiBlast_CBE 83.1452% -23 - C2 -3E5P 3.2 ?
1 PsiBlast_PDB 82.6152% -22 - C2 -3E5P 4.1 ?
21 PsiBlast_CBE 81.9552% -22 - C2 -3E6E 5.6 ?
59 HHSearch 81.7253% -21 * C2 *3E5P 3.2 ?
13 PsiBlast_PDB 80.4037% -42 - C2 -3OO2 - ALR1_STAAC -
12 PsiBlast_PDB 76.4837% -49 - C2 -4A3Q 3.6 ALR1_STAAM
84 HHSearch 75.5340% -30 - C2 -4LUY - ? -
15 PsiBlast_PDB 74.9039% -32 - C2 -4LUY - ? -
28 PsiBlast_CBE 74.5137% -42 - C2 -4A3Q 4.6 ALR1_STAAM
14 PsiBlast_PDB 74.0539% -30 - C2 -4LUS - ? -
77 HHSearch 72.9837% -25 - C2 -5IRP 4.8 ALR2_BACSU
29 PsiBlast_CBE 72.4837% -22 - C2 -3OO2 Error ALR1_STAAC
11 PsiBlast_PDB 72.0639% -30 - C2 -4LUT 5.0 ?
30 PsiBlast_CBE 71.3633% -23 - C2 -4Y2W 3.2 ALR1_CALS4
16 PsiBlast_PDB 71.0933% -24 - C2 -4Y2W 3.3 ALR1_CALS4
10 PsiBlast_PDB 70.3737% -23 - C2 -5IRP 5.5 ALR2_BACSU
27 PsiBlast_CBE 68.7337% -22 - C2 -5IRP 4.8 ALR2_BACSU
69 HHSearch 66.7335% -22 - C2 -4Y2W 3.3 ALR1_CALS4
60 HHSearch 66.5038% -25 - C2 -4A3Q 4.6 ALR1_STAAM
49 Fugue 56.5240% -47 - C2 -1BD0 6.9 ALR_GEOSE
51 Fugue 49.3441% -37 - C2 -1BD0 6.9 ALR_GEOSE