@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1994: (2018-01-24 )
MMKRTWRNSFVTNLNTPFMIGNIEIPNRTVLAPMAGVTNSAFRTIAKELGAGLVVMEMVSDKGIQYNNEKTLHMLHIDEGENPVSIQLFGSDEDSLARAAEFIQENTKTDIVDINMGCPVNKIVKNEAGAMWLKDPDKIYSIINKVQSVLDIPLTVKMRTGWADPSLAVENALAAEAAGVSALAMHGRTREQMYTGHADLETLYKVAQALTKIPFIANGDIRTVQEAKQRIEEVGADAVMIGRAAMGNPYLFNQINHYFETGEILPDLTFEDKMKIAYEHLKRLINLKGENVAVREFRGLAPHYLRGTSGAAKLRGAISQASTLAEIEALLQLEKA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_2(4BF9)
DUSC_ECOLI
[Raw transfer]




FMN_A_3(4YCP)
DUSC_ECOLI
[Raw transfer]




FNR_A_2(4XP7)
DUS2L_HUMAN
[Raw transfer]




FMN_A_3(4BFA)
DUSC_ECOLI
[Raw transfer]




FMN_A_2(3W9Z)
DUSC_ECOLI
[Raw transfer]




FMN_B_7(4BFA)
DUSC_ECOLI
[Raw transfer]




FMN_A_5(1VHN)
?
[Raw transfer]




40 HHSearch 85.8334%-106 * C2 *1VHN - ? -
1 PsiBlast_PDB 78.6135% -60 - C2 -1VHN 6.4 ?
42 HHSearch 72.6828% 9 - C2 -4BFA - DUSC_ECOLI -
61 Fugue 71.0532% 29 - C2 -1VHN - ? -
41 HHSearch 69.0827% 13 - C2 -4YCO - DUSC_ECOLI -
44 HHSearch 67.2624% -3 - C2 -3B0U - DUSAL_THET8 -
43 HHSearch 67.1724% -8 - C2 -3B0P - DUSAL_THET8 -
62 Fugue 65.2324% -12 - C2 -3B0P - DUSAL_THET8 -
63 Fugue 62.8127% 10 - C2 -4BFA - DUSC_ECOLI -
46 HHSearch 60.8225% 8 - C2 -4XP7 - DUS2L_HUMAN -
45 HHSearch 58.8726% 6 - C2 -4WFS - DUS2L_HUMAN -
3 PsiBlast_PDB 57.0434% 17 - C2 -4BFA 10.5 DUSC_ECOLI
10 PsiBlast_PDB 56.5127% -6 - C2 -3B0V - DUSAL_THET8 -
22 PsiBlast_CBE 56.3234% 10 - C2 -4YCO - DUSC_ECOLI -
8 PsiBlast_PDB 56.2733% 10 - C2 -4BF9 7.8 DUSC_ECOLI
7 PsiBlast_PDB 56.0734% 3 - C2 -4YCP 10.5 DUSC_ECOLI
23 PsiBlast_CBE 56.0634% 9 - C2 -4YCO - DUSC_ECOLI -
6 PsiBlast_PDB 55.6834% 10 - C2 -4YCO - DUSC_ECOLI -
4 PsiBlast_PDB 55.0629% 1 - C2 -3B0P - DUSAL_THET8 -
5 PsiBlast_PDB 54.9329% -4 - C2 -3B0U - DUSAL_THET8 -
2 PsiBlast_PDB 54.6034% 7 - C2 -3W9Z 10.6 DUSC_ECOLI
21 PsiBlast_CBE 54.3634% 16 - C2 -4BFA 10.3 DUSC_ECOLI