@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKW8: (2017-10-30 )
MEKSVTQENSVPVIGQRFRGFLPVVVDVETAGFNAQTDALLEIACIPIVYDAQGQFVPGPAFHAHINPFEGANLDRRSLDFIGIDPFNPMRIAMAEDERTALRRIFKSVNEVRKQQHCTHAVLVGHNAHFDLGFLQAAIARSGTKNQNPFHSFSVMDTVTLSAVMFGQTVLAKACIQAGIEFDGKEAHSALYDTQKTAELFCYILNKLSPYLLDSLVAAS

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_7(1J54)
DPO3E_ECOLI
[Raw transfer]




NACID_C_3(3VA3)
RNT_ECOLI
[Raw transfer]

-

NACID_H_8(3V9W)
RNT_ECOLI
[Raw transfer]

-

NACID_H_8(3V9W)
RNT_ECOLI
[Raw transfer]

-

NACID_H_8(3V9U)
RNT_ECOLI
[Raw transfer]

-

NACID_F_6(3V9W)
RNT_ECOLI
[Raw transfer]

-

NACID_E_5(3V9W)
RNT_ECOLI
[Raw transfer]

-

NACID_H_8(3NH1)
RNT_ECOLI
[Raw transfer]

-

NACID_D_4(3VA3)
RNT_ECOLI
[Raw transfer]

-

NACID_H_8(3V9X)
RNT_ECOLI
[Raw transfer]

-

NACID_H_8(3NH2)
RNT_ECOLI
[Raw transfer]

-

NACID_F_6(3NH1)
RNT_ECOLI
[Raw transfer]

-

NACID_B_2(4KAZ)
RNT_ECOLI
[Raw transfer]

-

NACID_E_5(3V9U)
RNT_ECOLI
[Raw transfer]

-

NACID_C_3(4KB0)
RNT_ECOLI
[Raw transfer]

-

NACID_G_7(3V9W)
RNT_ECOLI
[Raw transfer]

-

NACID_D_4(4KB0)
RNT_ECOLI
[Raw transfer]

-

NACID_E_5(3NH1)
RNT_ECOLI
[Raw transfer]

-

NACID_G_7(3NH1)
RNT_ECOLI
[Raw transfer]

-

NACID_D_4(3NH2)
RNT_ECOLI
[Raw transfer]

-

NACID_G_7(3NH2)
RNT_ECOLI
[Raw transfer]

-

NACID_C_3(3V9Z)
RNT_ECOLI
[Raw transfer]

-

NACID_D_4(3V9S)
RNT_ECOLI
[Raw transfer]

-

NACID_D_4(3V9Z)
RNT_ECOLI
[Raw transfer]

-

NACID_G_7(3V9U)
RNT_ECOLI
[Raw transfer]

-

NACID_F_6(3V9U)
RNT_ECOLI
[Raw transfer]

-

NACID_D_4(3NH0)
RNT_ECOLI
[Raw transfer]

-

NACID_C_3(3NH0)
RNT_ECOLI
[Raw transfer]

-

NACID_C_3(3V9S)
RNT_ECOLI
[Raw transfer]

-

NACID_C_3(3NH2)
RNT_ECOLI
[Raw transfer]

-

NACID_D_4(3VA0)
RNT_ECOLI
[Raw transfer]

-

NACID_F_6(3V9X)
RNT_ECOLI
[Raw transfer]

-

NACID_C_3(3VA0)
RNT_ECOLI
[Raw transfer]

-

NACID_E_5(3V9X)
RNT_ECOLI
[Raw transfer]

-

NACID_G_7(3V9X)
RNT_ECOLI
[Raw transfer]

-

36 PsiBlast_CBE 95.3253%-134 - C1 -3VA3 8.0 RNT_ECOLI
32 PsiBlast_CBE 94.5354%-134 - C1 -3NH1 9.6 RNT_ECOLI
9 PsiBlast_PDB 94.4554%-135 - C1 -4KAZ 8.9 RNT_ECOLI
27 PsiBlast_CBE 94.1654%-130 - C1 -3V9X 8.7 RNT_ECOLI
11 PsiBlast_PDB 93.8254%-135 - C1 -4KB1 - RNT_ECOLI -
40 PsiBlast_CBE 93.2253%-132 - C1 -3V9U 8.6 RNT_ECOLI
3 PsiBlast_PDB 93.2254%-136 - C1 -3NH1 8.1 RNT_ECOLI
16 PsiBlast_PDB 93.1953%-135 - C1 -3VA3 7.6 RNT_ECOLI
24 PsiBlast_CBE 93.1854%-133 - C1 -3V9Z 7.4 RNT_ECOLI
25 PsiBlast_CBE 92.9154%-132 - C1 -3V9X 9.5 RNT_ECOLI
10 PsiBlast_PDB 92.9154%-135 - C1 -4KB0 5.5 RNT_ECOLI
37 PsiBlast_CBE 92.8253%-136 - C1 -3V9W 8.7 RNT_ECOLI
31 PsiBlast_CBE 92.7554%-137 - C1 -3NH2 6.1 RNT_ECOLI
8 PsiBlast_PDB 92.7354%-134 - C1 -3VA0 7.3 RNT_ECOLI
38 PsiBlast_CBE 92.6553%-136 - C1 -3V9W 8.7 RNT_ECOLI
13 PsiBlast_PDB 92.5953%-135 - C1 -3NGZ - RNT_ECOLI -
2 PsiBlast_PDB 92.5854%-132 - C1 -3NH0 8.0 RNT_ECOLI
15 PsiBlast_PDB 92.5653%-137 - C1 -3V9W 8.3 RNT_ECOLI
34 PsiBlast_CBE 92.4254%-130 - C1 -3NH1 7.9 RNT_ECOLI
6 PsiBlast_PDB 92.2954%-129 - C1 -3V9X 8.4 RNT_ECOLI
7 PsiBlast_PDB 92.2554%-134 - C1 -3V9Z 7.9 RNT_ECOLI
30 PsiBlast_CBE 92.1854%-133 - C1 -3NH2 6.3 RNT_ECOLI
22 PsiBlast_CBE 91.8454%-135 - C1 -4KB0 5.3 RNT_ECOLI
5 PsiBlast_PDB 91.6954%-131 - C1 -3V9S 8.5 RNT_ECOLI
23 PsiBlast_CBE 91.5554%-132 - C1 -3VA0 7.4 RNT_ECOLI
26 PsiBlast_CBE 91.2254%-134 - C1 -3V9X 9.2 RNT_ECOLI
35 PsiBlast_CBE 91.2054%-131 - C1 -3NH0 8.5 RNT_ECOLI
39 PsiBlast_CBE 91.1453%-132 - C1 -3V9W 8.5 RNT_ECOLI
28 PsiBlast_CBE 91.1354%-131 - C1 -3V9S 8.5 RNT_ECOLI
33 PsiBlast_CBE 91.0254%-131 - C1 -3NH1 9.9 RNT_ECOLI
41 PsiBlast_CBE 90.0953%-131 - C1 -3V9U 8.2 RNT_ECOLI
29 PsiBlast_CBE 89.8654%-137 - C1 -3NH2 5.6 RNT_ECOLI
14 PsiBlast_PDB 89.7153%-135 - C1 -3V9U 7.6 RNT_ECOLI
42 PsiBlast_CBE 88.3853%-135 - C1 -3V9U 8.2 RNT_ECOLI
4 PsiBlast_PDB 86.2254%-141 - C1 -3NH2 5.3 RNT_ECOLI
55 HHSearch 84.9850% -82 - C1 -3V9W 8.7 RNT_ECOLI