@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VL33: (2017-10-31 )
MGKNVVVLGTQWGDEGKGKIVDLLTDQAAAVVRYQGGHNAGHTLVVGGKKTVLHLIPSGILREKVLCLIGNGVVLSPAALIEEMGILEAEGVPVKERLRISPNCPLILPNHIALDQAREKKRGNAKIGTTGRGIGPAYEDKVARRAVRVADLVRGGAALEEKLTEMLELHNFQLTQFYGVEAVKFEDVLALCNQWREVLAPLVIDVTKVLHDYRKEGKAVMFEGAQGSLLDIDHGTYPYVTSSNTTAGGVSSGSGMGPLHLDYVLGITKAYTTRVGAGPFPTELVYDAASDSGDPIGKHLGTVGHEFGASTGRQRRCGWFDAEILRRSVDVNSLSGICLTKLDVLDGLEEVKICVGYENTDSGCVGSSDAVSFECLKPIYETMPGWSESTVGLTSIDQLPANALAYVKRIEQLIECPIDIVSTGPDRAETIILRHPFSA

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGS_A_5(1NHT)
PURA_ECOLI
[Raw transfer]




PGS_A_5(1KSZ)
PURA_ECOLI
[Raw transfer]




RPD_A_5(1QF4)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




DOI_A_3(2GCQ)
PURA_ECOLI
[Raw transfer]




2SA_A_5(1MEZ)
PURA1_MOUSE
[Raw transfer]




IMP_C_3(1KJX)
PURA_ECOLI
[Raw transfer]




IMP_E_5(1KKB)
PURA_ECOLI
[Raw transfer]




IMP_A_5(1KKF)
PURA_ECOLI
[Raw transfer]




IMP_A_8(1IWE)
PURA1_MOUSE
[Raw transfer]




GCP_A_3(1HOP)
PURA_ECOLI
[Raw transfer]




GCP_B_4(1HOP)
PURA_ECOLI
[Raw transfer]




DPO_A_3(1KKF)
PURA_ECOLI
[Raw transfer]




GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]




AMP_C_3(1SON)
PURA_ECOLI
[Raw transfer]




GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_C_3(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_D_4(1DJ2)
PURA_ARATH
[Raw transfer]




AMP_B_8(4M9D)
PURA_BACAN
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




AMP_E_5(1MF1)
PURA1_MOUSE
[Raw transfer]




GDP_A_6(1GIN)
PURA_ECOLI
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




GTP_C_3(1LOO)
PURA1_MOUSE
[Raw transfer]




GDP_A_5(1CG1)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_A_4(2DGN)
PURA1_MOUSE
[Raw transfer]




GDP_A_4(1QF4)
PURA_ECOLI
[Raw transfer]




GPX_A_4(1CH8)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1GIM)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG3)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1JUY)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG0)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1CIB)
PURA_ECOLI
[Raw transfer]




GDP_A_4(2GCQ)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1MF0)
PURA1_MOUSE
[Raw transfer]




GDP_A_4(1CG4)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1LON)
PURA1_MOUSE
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_A_6(1LNY)
PURA1_MOUSE
[Raw transfer]




GDP_B_7(1LNY)
PURA1_MOUSE
[Raw transfer]




H5P_A_6(1SOO)
PURA_ECOLI
[Raw transfer]




GNH_A_3(1HOO)
PURA_ECOLI
[Raw transfer]




GNH_A_3(1HON)
PURA_ECOLI
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




IMP_B_7(1IWE)
PURA1_MOUSE
[Raw transfer]




HAD_C_3(1KKB)
PURA_ECOLI
[Raw transfer]




CIT_A_2(3R7T)
PURA_CAMJE
[Raw transfer]




24 PsiBlast_CBE 82.3663% -62 - C11 -1CG1 7.4 PURA_ECOLI
63 HHSearch 81.9065% -63 * C11 *1QF5 7.3 PURA_ECOLI
8 PsiBlast_PDB 81.7363% -62 - C11 -1QF5 7.3 PURA_ECOLI
11 PsiBlast_PDB 81.6763% -62 - C11 -1SON 5.4 PURA_ECOLI
7 PsiBlast_PDB 81.6563% -59 - C11 -1QF4 8.1 PURA_ECOLI
10 PsiBlast_PDB 81.6463% -57 - C11 -2GCQ 8.4 PURA_ECOLI
20 PsiBlast_PDB 81.5063% -58 - C11 -1JUY 8.4 PURA_ECOLI
6 PsiBlast_PDB 81.5063% -57 - C11 -1CH8 7.9 PURA_ECOLI
12 PsiBlast_PDB 81.4863% -61 - C11 -1SOO 5.2 PURA_ECOLI
9 PsiBlast_PDB 81.3563% -59 - C11 -1CIB 6.9 PURA_ECOLI
64 HHSearch 81.3364% -70 - C11 -3HID - PURA_YERPE -
5 PsiBlast_PDB 81.3363% -60 - C11 -1CG0 7.4 PURA_ECOLI
3 PsiBlast_PDB 81.3363% -59 - C11 -1KKB 6.6 PURA_ECOLI
4 PsiBlast_PDB 81.3063% -56 - C11 -1KKF 7.1 PURA_ECOLI
17 PsiBlast_PDB 81.2963% -60 - C11 -1GIN 7.2 PURA_ECOLI
16 PsiBlast_PDB 81.2963% -56 - C11 -1GIM 8.0 PURA_ECOLI
25 PsiBlast_CBE 81.2663% -61 - C11 -1CG4 7.6 PURA_ECOLI
18 PsiBlast_PDB 81.2263% -61 - C11 -1KSZ 6.4 PURA_ECOLI
26 PsiBlast_CBE 81.0763% -59 - C11 -1CG3 7.8 PURA_ECOLI
1 PsiBlast_PDB 80.9363% -68 - C11 -3HID - PURA_YERPE -
19 PsiBlast_PDB 80.6663% -57 - C11 -1NHT 6.0 PURA_ECOLI
15 PsiBlast_PDB 80.5463% -60 - C11 -1HOO 7.3 PURA_ECOLI
22 PsiBlast_CBE 80.4363% -69 - C11 -1HOP 6.1 PURA_ECOLI
2 PsiBlast_PDB 80.4363% -56 - C11 -1KJX 5.5 PURA_ECOLI
21 PsiBlast_CBE 80.3563% -65 - C11 -1HOP 6.1 PURA_ECOLI
23 PsiBlast_CBE 79.5563% -61 - C11 -1HON 6.5 PURA_ECOLI
53 Fugue 77.5765% -17 - C11 -1QF5 7.3 PURA_ECOLI
65 HHSearch 73.4446% -64 - C11 -4M9D 6.6 PURA_BACAN
74 HHSearch 73.0647% -73 - C11 -3R7T 3.2 PURA_CAMJE
68 HHSearch 67.4941% -23 - C11 -1DJ3 6.4 PURA_WHEAT
29 PsiBlast_CBE 66.2842% -22 - C11 -1DJ3 6.5 PURA_WHEAT
30 PsiBlast_CBE 66.2442% -22 - C11 -1DJ3 6.2 PURA_WHEAT
75 HHSearch 65.8838% -8 - C11 -1P9B 7.9 PURA_PLAFA
35 PsiBlast_CBE 65.6837% 2 - C11 -1P9B 7.9 PURA_PLAFA
71 HHSearch 65.1941% -19 - C11 -1DJ2 6.8 PURA_ARATH
36 PsiBlast_CBE 65.0040% -19 - C11 -2DGN 7.0 PURA1_MOUSE
42 PsiBlast_CBE 64.9840% -20 - C11 -1LNY 7.3 PURA1_MOUSE
43 PsiBlast_CBE 64.8740% -16 - C11 -1LNY 6.6 PURA1_MOUSE
40 PsiBlast_CBE 64.7840% -18 - C11 -1LOO 5.9 PURA1_MOUSE
31 PsiBlast_CBE 64.7542% -14 - C11 -1DJ2 6.8 PURA_ARATH
45 PsiBlast_CBE 64.7140% -17 - C11 -1IWE 6.2 PURA1_MOUSE
38 PsiBlast_CBE 64.4540% -20 - C11 -1MF0 6.5 PURA1_MOUSE
32 PsiBlast_CBE 64.2242% -15 - C11 -1DJ2 6.8 PURA_ARATH
41 PsiBlast_CBE 64.0740% -15 - C11 -1LON 6.8 PURA1_MOUSE
39 PsiBlast_CBE 64.0640% -16 - C11 -1MEZ 6.7 PURA1_MOUSE
44 PsiBlast_CBE 64.0240% -17 - C11 -1IWE 5.9 PURA1_MOUSE
37 PsiBlast_CBE 63.7240% -17 - C11 -1MF1 5.7 PURA1_MOUSE
46 PsiBlast_CBE 63.1739% -22 - C11 -2V40 6.2 PURA2_HUMAN
72 HHSearch 62.3140% -16 - C11 -2V40 6.2 PURA2_HUMAN