@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VNJ4: (2017-11-16 )
MPAVPHSSLNPVLIQLEQVSVHRDQRDILKKVDFALHENEIVTLIGPNGAGKSTLIKVLLGILKPSSGRVISNKKLKMAYVPQKFNPSHSLPLRVQDLLDLEKCSPALRQEIIQDTGIAKLQQSKVQQLSGGERQRVLLARALLRKPDILVLDEPMQGLDIQSEAELYEYVRSLPERYGCAILIVSHDLQWVMQGTQRVVCLNKHICCSGLPESIQQHPEYQAIFGTHRVFYQHHHDHCAHGDAAHPCPHNNRPHIHPEPEA

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_P_6(4CRM)
RLI1_YEAST
[Raw transfer]



ADP_A_4(1YQT)
?
[Raw transfer]



ADP_A_3(4P32)
LPTB_ECOLI
[Raw transfer]



ADP_A_5(5L22)
?
[Raw transfer]



ADP_B_3(3J15)
?
[Raw transfer]



ADP_B_3(5L22)
?
[Raw transfer]



GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
19 PsiBlast_PDB 70.8929% 5 - C1 -4G1U - HMUV_YERPE -
14 PsiBlast_PDB 69.7128% -24 - C1 -4P32 5.4 LPTB_ECOLI
17 PsiBlast_PDB 67.7628% -20 - C1 -4P31 - LPTB_ECOLI -
15 PsiBlast_PDB 66.8828% -15 - C1 -4QC2 - ? -
18 PsiBlast_PDB 64.2327% -19 - C1 -4P33 2.5 LPTB_ECOLI
1 PsiBlast_PDB 63.9629% -28 - C1 -2IT1 - ? -
40 HHSearch 63.2027% -47 - C1 -3RLF - MALK_ECOLI -
39 HHSearch 63.1127% -51 - C1 -2AWN - MALK_ECOLI -
42 HHSearch 62.6927% -42 * C1 *4YER - ? -
51 HHSearch 62.6628% -41 - C1 -2YYZ - ? -
38 HHSearch 62.1326% -48 - C1 -3FVQ - FBPC_NEIG1 -
2 PsiBlast_PDB 58.2529% -23 - C1 -1Z47 - ? -
56 HHSearch 57.8226% -52 - C1 -3NHB - -
52 HHSearch 55.6026% -47 - C1 -4TQU - ? -
49 HHSearch 54.7328% - - C1 -4HUQ - ECFA2_LACBA -
50 HHSearch 54.5828% - - C1 -4HZU - ECFA2_LACBA -
41 HHSearch 54.0528% 4 - C1 -5U1D - TAP1_HUMAN -
20 PsiBlast_PDB 53.4726% -37 - C1 -4TQU - ? -
12 PsiBlast_PDB 52.6434% -9 - C1 -2ONK - WTPC_ARCFU -
45 HHSearch 52.2125% -13 - C1 -4AYX - ABCBA_HUMAN -
8 PsiBlast_PDB 51.0833% -35 - C1 -3J15 4.0 ?
11 PsiBlast_PDB 44.0835% -17 - C1 -1YQT 4.5 ?
27 PsiBlast_CBE 40.5934% 13 - C1 -5L22 4.3 ?
24 PsiBlast_CBE 39.0131% -2 - C1 -4CRM 3.7 RLI1_YEAST
26 PsiBlast_CBE 37.6534% 16 - C1 -5L22 6.5 ?