@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPC2: (2017-11-20 )
MRNVSMTQRISEVVRNTNETKIRVRLNLDGTGQGTLNTGVPFLDHMIDQIKQHGLFDIDIHCDGDLEIDDHHTVEDCGITLGQAFAQALGDKKGLRRYGHFYAPLDEALSRVVVDLSGRPGLFMDIPFTRARIGTFDVDLFSEFFQGFVNHALMTLHIDNLKGKNSHHQIESVFKALARALRMACEIDPRAENTIASTKGSL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5LD_B_8(5DNX)
HIS7_PYRFU
[Raw transfer]




5LD_A_6(5DNX)
HIS7_PYRFU
[Raw transfer]




IYP_A_4(4MU4)
HIS5B_ARATH
[Raw transfer]




3TR_A_2(4LPF)
?
[Raw transfer]




FMT_A_4(4QNJ)
HIS5B_ARATH
[Raw transfer]




5DL_A_6(5DNL)
HIS7_PYRFU
[Raw transfer]




TRI_A_4(4MU0)
HIS5B_ARATH
[Raw transfer]




5DL_B_11(5DNL)
HIS7_PYRFU
[Raw transfer]




IG2_A_4(4MU3)
HIS5B_ARATH
[Raw transfer]




IMD_A_4(4MU1)
HIS5B_ARATH
[Raw transfer]




EDO_A_10(5EKW)
HIS5B_ARATH
[Raw transfer]




EDO_A_6(4MU3)
HIS5B_ARATH
[Raw transfer]




10 PsiBlast_PDB 91.8354%-107 - C2 -4MU4 3.5 HIS5B_ARATH
5 PsiBlast_PDB 91.6254%-104 - C2 -5EL9 - HIS5B_ARATH -
6 PsiBlast_PDB 91.3354%-101 - C2 -5ELW - HIS5B_ARATH -
61 HHSearch 91.2053%-104 - C2 -5EL9 - HIS5B_ARATH -
4 PsiBlast_PDB 90.7054%-102 - C2 -5EKW 3.4 HIS5B_ARATH
42 PsiBlast_CBE 90.3854%-110 - C2 -4QNK - HIS5B_ARATH -
9 PsiBlast_PDB 89.9454%-110 - C2 -4MU3 3.7 HIS5B_ARATH
7 PsiBlast_PDB 89.5754%-113 - C2 -4QNK - HIS5B_ARATH -
41 PsiBlast_CBE 89.5154%-111 - C2 -4QNK - HIS5B_ARATH -
8 PsiBlast_PDB 89.1454%-114 - C2 -4MU1 3.7 HIS5B_ARATH
2 PsiBlast_PDB 88.6854%-113 - C2 -4MU0 4.4 HIS5B_ARATH
3 PsiBlast_PDB 88.5654%-111 - C2 -4QNJ 3.0 HIS5B_ARATH
1 PsiBlast_PDB 88.2854%-116 - C2 -2F1D - HIS5A_ARATH -
15 PsiBlast_PDB 81.4938%-142 - C2 -5DNL 4.6 HIS7_PYRFU
65 HHSearch 81.1941%-158 - C2 -2AE8 - HIS7_STAAN -
45 PsiBlast_CBE 81.0438%-137 - C2 -5DNX - HIS7_PYRFU -
66 HHSearch 80.9941%-157 - C2 -2AE8 - HIS7_STAAN -
44 PsiBlast_CBE 80.8938%-138 - C2 -5DNX 3.2 HIS7_PYRFU
47 PsiBlast_CBE 80.8438%-141 - C2 -5DNL - HIS7_PYRFU -
46 PsiBlast_CBE 80.7638%-137 - C2 -5DNL 4.5 HIS7_PYRFU
16 PsiBlast_PDB 80.4238%-138 - C2 -5DNX 3.2 HIS7_PYRFU
14 PsiBlast_PDB 73.4043% -84 - C2 -4LPF 4.7 ?