@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRK7: (2017-12-03 )
MFKNRFFNTMQIQNQVQLKPFNTLSLDVTASHYTKVKSIEDIEEALAFAKEHELNVLVLSGGSNMLLPQQINALVIHLDIQGIDVLSEDQDFIRVKVGAGQVWHDFVLYTTKQNWFGLQNLALIPGLVGASPVQNIGAYGVEVGEFIESVQVYDRLLKQTGSISAADCHFSYRHSIFKDEPARYIITHVTFKLLKQANLKLNYGDLKQAVGDNLTAENLQNQVIHIRQSKLPDPKEYPNVGSFFKNPIVNTQEFERLIAQFSTIPHYPQANGNVKIAAGWLIDQAGWKGKQLGVVGMFHKQALVLVNYANASLADVKKTYQAVQHDVEQRFQIMLEPEPVLYNNLGLIENHTE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EPU_C_3(2MBR)
MURB_ECOLI
[Raw transfer]



EEB_B_2(1MBB)
MURB_ECOLI
[Raw transfer]



EPU_C_3(1UXY)
MURB_ECOLI
[Raw transfer]



NAP_A_3(4JB1)
MURB_PSEAE
[Raw transfer]



GOL_A_8(4JB1)
MURB_PSEAE
[Raw transfer]



FAD_B_2(1UXY)
MURB_ECOLI
[Raw transfer]



FAD_C_3(1MBB)
MURB_ECOLI
[Raw transfer]



FAD_B_2(2MBR)
MURB_ECOLI
[Raw transfer]



FAD_A_2(4JB1)
MURB_PSEAE
[Raw transfer]



FAD_B_2(2MBR)
MURB_ECOLI
[Raw transfer]



FAD_A_3(2Q85)
MURB_ECOLI
[Raw transfer]



FAD_C_3(1MBT)
MURB_ECOLI
[Raw transfer]



GOL_A_4(3TX1)
MURB_LISMO
[Raw transfer]



EPU_C_3(1UXY)
?
[Raw transfer]



FAD_B_2(1UXY)
?
[Raw transfer]



973_A_2(2Q85)
MURB_ECOLI
[Raw transfer]
30 HHSearch 85.5141% -56 - C5 -2MBR 13.1 MURB_ECOLI
2 PsiBlast_PDB 85.3743% -36 - C5 -4JB1 8.6 MURB_PSEAE
1 PsiBlast_PDB 85.2043% -40 - C5 -4JAY - MURB_PSEAE -
21 PsiBlast_CBE 85.1243% -40 - C5 -4JAY - MURB_PSEAE -
23 PsiBlast_CBE 84.8643% -38 - C5 -4JAY - MURB_PSEAE -
22 PsiBlast_CBE 84.7743% -39 - C5 -4JAY - MURB_PSEAE -
7 PsiBlast_PDB 84.7642% -69 - C5 -1UXY 13.2 MURB_ECOLI
3 PsiBlast_PDB 84.6642% -68 - C5 -2Q85 12.7 MURB_ECOLI
4 PsiBlast_PDB 84.5342% -69 - C5 -1MBB 13.0 MURB_ECOLI
6 PsiBlast_PDB 84.4942% -67 - C5 -2MBR 12.9 MURB_ECOLI
29 HHSearch 83.3443% -32 - C5 -4JB1 13.8 MURB_PSEAE
5 PsiBlast_PDB 82.8942% -71 - C5 -1MBT 12.8 MURB_ECOLI
28 HHSearch 82.3343% -31 - C5 -4JAY - MURB_PSEAE -
31 HHSearch 82.2636% -68 - C5 -3I99 - MURB_VIBCH -
8 PsiBlast_PDB 80.7537% -61 - C5 -3I99 - MURB_VIBCH -
32 HHSearch 74.9335% -17 - C5 -5JZX - MURB_MYCTU -
25 PsiBlast_CBE 74.1734% -13 - C5 -5JZX - MURB_MYCTU -
24 PsiBlast_CBE 73.8034% -15 - C5 -5JZX - MURB_MYCTU -
33 HHSearch 73.5435% -18 - C5 -5JZX - MURB_MYCTU -
9 PsiBlast_PDB 72.9234% -5 - C5 -5JZX - MURB_MYCTU -
48 Fugue 65.0938%-127 - C5 -1UXY Error ?
49 Fugue 51.4843%-100 - C5 -1UXY Error ?