@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U026: (2017-12-17 )
MKIILAIIQDKDSNRLSNELIDANIRATKLSSTGGFLKAGNSTFIVGIEDDRVEEALEIIKKTCESRKQFVSTPVTLDISMDGGVPYPVEVEVGGATVFVLPVEGFHQF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2BA_C_7(4RWW)
?
[Raw transfer]




2BA_B_5(4D3H)
?
[Raw transfer]




2BA_B_6(4RWW)
?
[Raw transfer]




2BA_A_4(4RWW)
?
[Raw transfer]




2BA_A_2(4WK1)
?
[Raw transfer]




2BA_A_2(4WK1)
?
[Raw transfer]




2BA_C_6(4D3H)
?
[Raw transfer]




2BA_A_4(4D3H)
?
[Raw transfer]




2BA_A_4(4D3H)
?
[Raw transfer]




77 HHSearch 89.0158%-152 - C2 -4RLE - YAAQ_BACSU -
22 PsiBlast_CBE 88.6961%-156 - C2 -4RWW 9.1 ?
8 PsiBlast_PDB 88.6457%-152 - C2 -4RLE - YAAQ_BACSU -
21 PsiBlast_CBE 87.8861%-154 - C2 -4RWW 9.0 ?
80 HHSearch 85.7861%-144 - C2 -4RWW 8.9 ?
2 PsiBlast_PDB 85.7861%-144 - C2 -4RWW - ? -
78 HHSearch 85.1959%-144 - C2 -4D3H 7.4 ?
24 PsiBlast_CBE 84.8058%-144 - C2 -4D3H 7.4 ?
23 PsiBlast_CBE 81.9558%-164 - C2 -4D3H 8.4 ?
7 PsiBlast_PDB 80.7955%-150 - C2 -3M05 - ? -
6 PsiBlast_PDB 80.1358%-148 - C2 -4D3H 7.1 ?
4 PsiBlast_PDB 80.0058%-185 - C2 -4WK3 - ? -
79 HHSearch 79.7359%-161 - C2 -4WK1 7.2 ?
3 PsiBlast_PDB 79.4458%-161 - C2 -4WK1 7.2 ?
1 PsiBlast_PDB 77.6861%-156 - C2 -4RWX - ? -
86 HHSearch 60.2323% -43 - C2 -3NCR - ? -
85 HHSearch 60.0323% -42 * C2 *3NCQ - ? -
5 PsiBlast_PDB 57.6358% - - C2 -4D3G - ? -
98 HHSearch 56.7318% -79 - C2 -4USJ - ? -
83 HHSearch 54.0324% -12 - C2 -4CO1 - ? -