@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U1N6: (2017-12-21 )
MPFHSTPNKGGTFDMTVKVGINGFGRIGRLAFRRIKEVSDDIEVVAINDLTSPTMLAQLLQFDSTHGTYPGTVTATEDSIVVDGEATRVYAEPDASKIPWAKENGVDIVLECTGFYTSEEKAKAHLDAGVKRVVISAPAGAMKTIVYNVNDDTLDENDKIISAGSCTTNCLAPMAYFLNNEFGIEVGTMTTVHAYTSTQMLLDGPVKGGNLRAARSAADNTIPHSTGAAKAIGLVIPELQGKLQGHAQRVPVVDGSLTELVSVLKTKVTADQVNEAIKKHTVDNPSFGYDDRQIVSSDVIGTTQGSIFDPTQTEVTTAGDFQLVKTVAWYDNEYGFTCQMIRLLEKFANL

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_4(2EP7)
G3P_AQUAE
[Raw transfer]



NAD_B_4(2EP7)
G3P_AQUAE
[Raw transfer]



NAD_A_3(2EP7)
G3P_AQUAE
[Raw transfer]



NAD_Q_15(1HDG)
G3P_THEMA
[Raw transfer]



NAD_B_4(3L0D)
?
[Raw transfer]



NAD_O_13(1HDG)
G3P_THEMA
[Raw transfer]



NAD_O_13(1HDG)
G3P_THEMA
[Raw transfer]



NAD_A_3(3PYM)
G3P3_YEAST
[Raw transfer]



NAD_A_3(3L0D)
?
[Raw transfer]



NAD_B_5(3PYM)
G3P3_YEAST
[Raw transfer]
2 PsiBlast_PDB 80.8858% -46 - C3 -5VMT - ? -
24 PsiBlast_CBE 80.8558% -44 - C3 -5VMT - ? -
40 PsiBlast_CBE 80.8457% -34 - C3 -3VAZ - G3P1_STAAR -
21 PsiBlast_CBE 80.8358% -48 - C3 -5VMT - ? -
47 PsiBlast_CBE 80.7457% -34 - C3 -3LC1 - G3P1_STAAR -
37 PsiBlast_CBE 80.6757% -32 - C3 -3VAZ - G3P1_STAAR -
22 PsiBlast_CBE 80.6458% -46 - C3 -5VMT - ? -
36 PsiBlast_CBE 80.5357% -30 - C3 -3VAZ - G3P1_STAAR -
69 PsiBlast_CBE 80.4356% -33 - C3 -3KSZ - G3P1_STAAR -
4 PsiBlast_PDB 80.2157% -30 - C3 -3L6O - G3P1_STAAR -
42 PsiBlast_CBE 80.1757% -31 - C3 -3LVF - G3P1_STAAR -
17 PsiBlast_PDB 80.1656% -30 - C3 -3KSD - G3P1_STAAR -
9 PsiBlast_PDB 80.1557% -31 - C3 -3LC1 - G3P1_STAAR -
67 PsiBlast_CBE 80.0856% -30 - C3 -3KSZ - G3P1_STAAR -
38 PsiBlast_CBE 80.0157% -35 - C3 -3VAZ - G3P1_STAAR -
58 PsiBlast_CBE 79.9257% -31 - C3 -3K9Q - G3P1_STAAR -
18 PsiBlast_PDB 79.9056% -29 - C3 -3KSZ - G3P1_STAAR -
41 PsiBlast_CBE 79.8857% -34 - C3 -3LVF - G3P1_STAAR -
49 PsiBlast_CBE 79.8357% -32 - C3 -3KV3 - G3P1_STAAR -
122 HHSearch 79.8275% 4 - C3 -5J9G - ? -
137 HHSearch 76.9749% -51 - C3 -2EP7 10.0 G3P_AQUAE
86 PsiBlast_CBE 72.8348% -43 - C3 -2EP7 9.8 G3P_AQUAE
85 PsiBlast_CBE 71.8948% -44 - C3 -2EP7 10.0 G3P_AQUAE
126 HHSearch 71.7444% -9 - C3 -3PYM 8.8 G3P3_YEAST
125 HHSearch 69.5044% -8 - C3 -3PYM 7.7 G3P3_YEAST
107 Fugue 68.5149% 12 - C3 -1HDG 9.1 G3P_THEMA
84 PsiBlast_CBE 68.0850% 12 - C3 -1HDG 9.9 G3P_THEMA
83 PsiBlast_CBE 67.4350% 9 - C3 -1HDG 10.0 G3P_THEMA
99 PsiBlast_CBE 66.1946% -4 - C3 -3L0D 7.4 ?
100 PsiBlast_CBE 65.4346% -3 - C3 -3L0D 8.2 ?