@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXK9: (2018-01-04 )
MRTRRLGQTLFSQPFLGEISMNLTIQEIAQAVGSECSALTKITNVEFDSRKITEGSLFVPLAGTRDGHEFIQQAITNGASASFWSLPVEQAPKNFPVIPVADPLKAMQQLATYYLEKVGAEVVAITGSNGKTTTKDLTASVLSEKYKTYKTQGNYNNNIGLPYTILHMPQDTEKIVLEMGMDHANEITELSLMAQPKAAAITMIGEAHIENLGSREGIAKAKMEITDGLVSDGLLVVPADEPLLTPLTATLVQTVTTFGIGNGDVHAEVTAKGKAQTDFVVEGETFTIPLPGSYNVTNALIAYTIGRFFGLSIPEIRQGLAHVSITQNRTEWLTAGNGAAILSDVYNANPTAMGLVLDTFKNLPTKGRRIAVLADMLELGKESLNMHAQMSEHIDPEKFAMIFLYGEQMHALKEELNQKYPQLPVFYLEKEKNKLIDAIKQNLEATDSIMLKGSNSMGLFEVVEQLQQMK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2GN_A_2(3ZM6)
?
[Raw transfer]



2GN_A_2(3ZM6)
?
[Raw transfer]



1LG_A_2(2AM1)
?
[Raw transfer]



1LG_A_2(2AM1)
?
[Raw transfer]



IGM_A_2(3ZM5)
?
[Raw transfer]



ANP_A_6(4CVM)
?
[Raw transfer]



2LG_A_2(2AM2)
?
[Raw transfer]



ALA_A_2(4CVM)
?
[Raw transfer]



ALA_A_2(4CVK)
?
[Raw transfer]



API_A_6(4CVK)
?
[Raw transfer]



MUB_A_4(4CVK)
?
[Raw transfer]
31 HHSearch 77.8548% 21 - C1 -3ZM6 11.2 ?
30 HHSearch 77.2848% 22 - C1 -2AM1 8.0 ?
2 PsiBlast_PDB 76.3446% 29 - C1 -3ZM6 11.2 ?
1 PsiBlast_PDB 75.8746% 29 - C1 -3ZM5 9.5 ?
3 PsiBlast_PDB 75.1145% 30 - C1 -2AM1 8.0 ?
4 PsiBlast_PDB 73.9345% 32 - C1 -2AM2 7.2 ?
10 PsiBlast_PDB 69.6928% -9 - C1 -4CVM 7.4 ?
9 PsiBlast_PDB 69.0028% -11 - C1 -4CVK 2.6 ?
5 PsiBlast_PDB 67.9932% -19 - C1 -1GG4 - MURF_ECOLI -
27 HHSearch 67.0928% 21 * C1 *4QDI - ? -
32 HHSearch 67.0828% 1 - C1 -4CVM - ? -
33 HHSearch 65.6428% 3 - C1 -4CVK - ? -
7 PsiBlast_PDB 65.1630% 14 - C1 -4QDI - ? -
34 HHSearch 63.6527% 11 - C1 -3ZL8 - ? -
8 PsiBlast_PDB 63.4627% 14 - C1 -3ZL8 - ? -
6 PsiBlast_PDB 62.9930% 11 - C1 -4ZIY - ? -
37 HHSearch 56.4723% 3 - C1 -4BUB - MURE_THEMA -
29 HHSearch 52.4833% -9 - C1 -1GG4 - -
48 HHSearch 47.4420% 0 - C1 -4HV4 - MURC_YERPE -
51 HHSearch 46.1019% -9 - C1 -3NRS - ? -