@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0A4: (2018-01-19 )
MKLTVFCGSRFGNKESYKFIAQTLGKYMAQEEIELVYGGSYSGIMGVISKTVLENNGKVTGIYPNGLFETELPGKDVTTFIPTETIDERKVLLFEKGDAVLVFPGGLGTLEEFSQLLSWIAIGLTPDKPIGILNIGGYYSGLQQLLETFAKEDFMDKKWLDQVIFSNNPLELVNELRAVSIKNQLLLKEAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TAR_A_7(5AJT)
?
[Raw transfer]




TAR_C_11(5AJT)
?
[Raw transfer]




SRT_D_13(5AJT)
?
[Raw transfer]




TAR_B_9(5AJT)
?
[Raw transfer]




RP5_A_2(5AJU)
?
[Raw transfer]




GOL_C_11(5ITS)
?
[Raw transfer]




GOL_C_12(5ITS)
?
[Raw transfer]




GOL_A_7(5ITS)
?
[Raw transfer]




EDO_A_5(2Q4D)
LOG8_ARATH
[Raw transfer]




EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]




EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]




UNL_A_3(3QUA)
?
[Raw transfer]




32 HHSearch 90.2433%-155 - C4 -1YDH 3.2 LOG8_ARATH
27 HHSearch 88.6330%-141 - C4 -5ITS 3.0 ?
1 PsiBlast_PDB 88.5136%-139 - C4 -1T35 - YVDD_BACSU -
28 HHSearch 87.5130%-138 - C4 -5ITS - ? -
29 HHSearch 87.0434%-138 - C4 -2A33 - LOG3_ARATH -
2 PsiBlast_PDB 84.0330%-136 - C4 -5ITS 3.3 ?
30 HHSearch 82.6237% -59 - C4 -1T35 - YVDD_BACSU -
38 HHSearch 81.7427%-130 * C4 *3QUA - ? -
31 HHSearch 81.3437% -55 - C4 -1T35 - YVDD_BACSU -
4 PsiBlast_PDB 80.9232% -29 - C4 -5AJU 3.3 ?
5 PsiBlast_PDB 80.6236%-155 - C4 -1YDH 3.2 LOG8_ARATH
23 PsiBlast_CBE 80.3332% -31 - C4 -5AJT 3.4 ?
3 PsiBlast_PDB 80.1932% -27 - C4 -5AJT - ? -
22 PsiBlast_CBE 80.1132% -29 - C4 -5AJT 2.5 ?
21 PsiBlast_CBE 80.0332% -29 - C4 -5AJT 3.5 ?
36 HHSearch 77.7225%-135 - C4 -1WEK - ? -
6 PsiBlast_PDB 77.1736%-150 - C4 -2Q4D 3.6 LOG8_ARATH
24 HHSearch 77.0032% -29 - C4 -5AJT 4.1 ?
7 PsiBlast_PDB 74.5130% -85 - C4 -3QUA 2.8 ?
33 HHSearch 72.4526% -76 - C4 -3SBX - LOGH_MYCMM -