@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y203: (2018-01-28 )
MCTAITYATKDHYFGRNFDYEMSYNEVVTITPRNYRFDFRKVKNLDKHYAMIGIAAGVSNYPLYYEATNEKGLSMAGLNFPGNADYKELQEGKDNVAPFEFIPWILGQCSTIDEAKELLATINLVNIDFSEKLPLSPLHWLLADKEKSIVIESMKDGLHLYDNPVGVLTNNPPFDYQLFNLNNYRSLSNGTRV

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_5(2BJG)
CBH_CLOPE
[Raw transfer]




TAU_A_3(2BJF)
CBH_CLOPE
[Raw transfer]




TAU_A_3(2BJF)
CBH_CLOPE
[Raw transfer]




GOL_B_5(2RF8)
CBH_CLOPE
[Raw transfer]




GOL_A_8(2RG2)
CBH_CLOPE
[Raw transfer]




GOL_A_3(2RF8)
CBH_CLOPE
[Raw transfer]




GOL_A_8(2RG2)
CBH_CLOPE
[Raw transfer]




GLY_A_5(2RLC)
CBH_CLOPE
[Raw transfer]




EDO_A_7(2BJG)
CBH_CLOPE
[Raw transfer]




1 PsiBlast_PDB 88.2477%-103 - C5 -4WL3 - ? -
2 PsiBlast_PDB 77.3958% -48 - C5 -5HKE - ? -
27 HHSearch 77.2960% -49 - C5 -5HKE - ? -
6 PsiBlast_PDB 65.8440% -16 - C5 -2HF0 - ? -
29 HHSearch 62.8741% 4 - C5 -2RG2 3.2 CBH_CLOPE
4 PsiBlast_PDB 61.6543% 30 - C5 -2BJG 3.0 CBH_CLOPE
10 PsiBlast_PDB 61.6233% 0 - C- -2OQC - YXEI_BACSU -
22 PsiBlast_CBE 60.8843% 32 - C5 -2BJG 3.0 CBH_CLOPE
49 Fugue 60.7231% -5 * C5 *3PVA - PAC_LYSSH -
28 HHSearch 60.6830% -13 - C5 -2QUY - PAC_LYSSH -
30 HHSearch 60.4333% 0 - C- -2OQC - YXEI_BACSU -
23 PsiBlast_CBE 59.9142% 26 - C5 -2RF8 2.9 CBH_CLOPE
26 HHSearch 59.8442% 24 - C5 -2BJF 3.2 CBH_CLOPE
5 PsiBlast_PDB 59.8042% 37 - C5 -2RF8 3.1 CBH_CLOPE
7 PsiBlast_PDB 59.7842% 39 - C5 -2RG2 3.2 CBH_CLOPE
12 PsiBlast_PDB 59.5930% -11 - C5 -2QUY - PAC_LYSSH -
3 PsiBlast_PDB 59.4543% 33 - C5 -2BJF 3.2 CBH_CLOPE
32 HHSearch 58.7830% -9 - C5 -3PVA - PAC_LYSSH -
33 HHSearch 58.7640% 1 - C5 -2HF0 - ? -
11 PsiBlast_PDB 57.9031% -12 - C5 -3PVA - PAC_LYSSH -
8 PsiBlast_PDB 50.7942% 22 - C5 -2RLC 2.7 CBH_CLOPE