@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1260: (2015-12-06 )
MVMKIIELKEATVQVSNGLAEMKTILDHVNLSIYEHDFITILGGNGAGKSTLFNVIAGTLMLSGGNIYIMGQDVTNLPAEKRAKYLSRVFQDPKMGTAPRMTVAENLLVAKFRGEKRPLVPRKITNYTEEFQKLIARTGNGLDRHLETPTGLLSGGQRQALSLLMATLKKPNLLLLDEHTAALDPRTSVSLMGLTDEFIKQDSLTALMITHHMEDALKYGNRILVMKDGKIVRDLNQAQKNKMAIADYYQLFD

Atome Classification :

(20 SA) .........10........20.....--...30........40........50........60........70....---.-----.-------------..80----........90-........100.....---..110...-------.....120.......130.......140...--.-...150.......160.......170.......180.......190.......200.......210.......220.......230-----.-----......240----.......250.----------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MVMKIIELKEATVQVSNGLAEMKTIL--DHVNLSIYEHDFITILGGNGAGKSTLFNVIAGTLMLSGGNIYIMGQDVT---N-----L-------------PAEK----RAKYLSRVFQ-DPKMGTAPRMTVAENL---LVA-KFRG-------EKRPLVPRKITNYTEEFQKLIARTGNGLDRH--L-ETPTGLLSGGQRQALSLLMATLKKPNLLLLDEHTAALDPRTSVSLMGLTDEFIKQDSLTALMITHHMEDALKYGNRILVMKDGKIV-----R-----DLNQAQKNK----MAIADYYQLFD----------------------------------------------------------------------------------------------------------
56 Fugue 85.0327% -93 - C1 -1OXS ? C:[1-352] --MVRIIVKNVSKVFKKG---KVVAL--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGK-----L-------------IVPP----EDRKIGMVFQ-TWAL--YPNLTAFENI---AFPLTNMK-------MSKEEIRKRVEEVAKIL---------DIHHV--L-NHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----QVGKPEDLYDNPVSI----QVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK
27 PsiBlast_CBE 80.4533%-114 - C1 -1OXU ? B:[21-221] -------------------------L--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVA---SNGKLIV-------------PPED----RK--IGMVFQ---TWALYPNLTAFENI---AF----------------PLTNMKMSK--EEIRKRVEEVAKILDIHHVL-NHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----Q-----VGKPEDLYD----NPVSIQVASLI----------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 79.3530% -94 - C1 -1F3O Y796_METJA A:[2-226] -----IKLKNVTKTYKMG-EEIIYAL--KNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTN---D-----L-------------DDDELTKIRRDKIGFVFQ---QFNLIPLLTALENVELPLIF-KYRG-------AMSGEERRKRALECLKMAELEERFAN---------HKPN-QLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEVE-----R-----EEKLRGF---------------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 79.2733%-113 - C1 -1OXV ? D:[21-221] -------------------------L--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVA---SNGKLIV-------------PPED----RK--IGMVFQ---TWALYPNLTAFENI---AF----------------PLTNMKMSK--EEIRKRVEEVAKILDIHHVL-NHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----Q-----VGKPEDLYD----NPVSIQVASLI----------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 79.0433%-113 - C1 -1OXV ? B:[21-221] -------------------------L--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVA---SNGKLIV-------------PPED----RK--IGMVFQ---TWALYPNLTAFENI---AF----------------PLTNMKMSK--EEIRKRVEEVAKILDIHHVL-NHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----Q-----VGKPEDLYD----NPVSIQVASLI----------------------------------------------------------------------------------------------------------
58 Fugue 78.6225%-100 - C1 -1Z47 ? A:[11-355] -GSMTIEFVGVEKIYPGG----ARSV--RGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVT---D-----L-------------PPQK----RN--VGLVFQ-NYAL--FQHMTVYDNV---SFGLREKR-------VPKDEMDARVRELLRFM---------RLESY--A-NRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVE-----Q-----FGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR-
28 PsiBlast_CBE 78.4433%-111 - C1 -1OXU ? A:[21-221] -------------------------L--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVA---SNGKLIV-------------PPED----RK--IGMVFQ---TWALYPNLTAFENI---AF----------------PLTNMKMSK--EEIRKRVEEVAKILDIHHVL-NHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----Q-----VGKPEDLYD----NPVSIQVASLI----------------------------------------------------------------------------------------------------------
26 PsiBlast_CBE 78.3433%-110 - C1 -1OXU ? C:[21-221] -------------------------L--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVA---SNGKLIV-------------PPED----RK--IGMVFQ---TWALYPNLTAFENI---AF----------------PLTNMKMSK--EEIRKRVEEVAKILDIHHVL-NHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----Q-----VGKPEDLYD----NPVSIQVASLI----------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 77.0830% -97 - C1 -1L2T Y796_METJA A:[1-226] ----MIKLKNVTKTYKMG-EEIIYAL--KNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTN---D-----L-------------DDDELTKIRRDKIGFVFQ---QFNLIPLLTALENVELPLIF-KYRGAMSGEERRKRALECLKMAELEERFAN----------------HKPNQL-SGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEVE-----R-----EEKLR-----------------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 76.0433%-107 - C1 -1OXV ? A:[21-221] -------------------------L--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVA---SNGKLIV-------------PPED----RK--IGMVFQ---TWALYPNLTAFENI---AF----------------PLTNMKMSK--EEIRKRVEEVAKILDIHHVL-NHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----Q-----VGKPEDLYD----NPVSIQVASLI----------------------------------------------------------------------------------------------------------
29 PsiBlast_CBE 76.0233%-105 - C1 -1OXS ? C:[21-221] -------------------------L--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVA---SNGKLIV-------------PPED----RK--IGMVFQ---TWALYPNLTAFENI---AF----------------PLTNMKMSK--EEIRKRVEEVAKILDIHHVL-NHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----Q-----VGKPEDLYD----NPVSIQVASLI----------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 75.3229% -98 - C1 -3TIF Y796_METJA A:[1-226] ----MVKLKNVTKTYKMG-EEIIYAL--KNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTN---D-----L-------------DDDELTKIRRDKIGFVFQ---QFNLIPLLTALENVELPLIF-KYRGAMSGEERRKRALECLKMAELEERFAN----------------HKPNQL-SGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEVE-----R-----EEKLR-----------------------------------------------------------------------------------------------------------------------------
30 PsiBlast_CBE 74.6932%-104 - C1 -1OXX ? K:[21-221] -------------------------L--DNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVA---SNGKLIV-------------PPED----RK--IGMVFQ---TWALYPNLTAFENI---AF----------------PLTNMKMSK--EEIRKRVEEVAKILDIHHVL-NHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV-----Q-----VGKPEDLYD----NPVSIQVASLI----------------------------------------------------------------------------------------------------------
54 Fugue 74.2925%-105 - C1 -3TUZ METN_ECOLI H:[23-362] ---HMIKLSNITKVFHQG-TRTIQAL--NNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT---T-----L-------------SESE----LTKARRQIGMIFQHFNLLSSRTVFGNVA--LPL-ELDN-------TPKDEVKRRVTELLSLV---------GLGDK--H-DSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVS-----EVFSHPKTP----LAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV-------------
21 PsiBlast_CBE 73.4832%-109 - C1 -2IT1 ? B:[17-214] -----------------------TAL--NNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVT---E-----L-------------PPKD----RN--VGLVFQ-N--WALYPHMTVYKNI-------AFPL-------ELRKAPREEIDKKVREVAKMLH-----IDKL--L-NRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEIL-----Q-----VGTPDEVYY----KPKYKFVGGFL----------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 73.1432%-105 - C1 -2IT1 - ? A:[17-214] -----------------------TAL--NNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVT---E-----L-------------PPKD----RN--VGLVFQ-N--WALYPHMTVYKNI-------AFPL-------ELRKAPREEIDKKVREVAKMLH-----IDKL--L-NRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEIL-----Q-----VGTPDEVYY----KPKYKFVGGFL----------------------------------------------------------------------------------------------------------
51 HHSearch 69.1426% -95 - C1 -1B0U HISP_SALTY A:[5-245] ---NKLHVIDLHKR---Y--GGHEVL--KGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNIN---L-----VRDKDGQLKVADKNQLRL----LRTRLTMVFQ-HFNL--WSHMTVLENV---MEA-PIQV-------LG-----LSKHDARERALKYLAKV--GIDER--AQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVTHEMGFARHVSSHVIFLHQGKIE-----E-----E--GDPEQV----FGNPQSPRLQQ----------------------------------------------------------------------------------------------------------
33 HHSearch 68.2728% -99 - C1 -1V43 - ? A:[9-233] -KMVEVKLENLTKRFG-----NFTAV--NKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVT---Y-----L-------------PPK------DRNISMVFQ---------HMTVYENI---AFP-L--K-------KF------PKDEIDKRVRWAAELL--QIEEL--L-NRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLL-----Q-----I--GSPTEV----YLRPNSVFVAT----------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 68.2427%-111 - C1 -3PUV MALK_ECOLI A:[2-214] ----------ASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMN---D-----T-------------PPAE----RG--VGMVFQ---SYALYPHLSVAENM---SFGLKLAG-------AKKEVINQRVNQVAEVLQ-----LAHLLDRK--P-KA----LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVA-----Q-----VGKPLELYH----YPADRFVAGFI----------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 67.7927%-112 - C1 -3PUW MALK_ECOLI A:[2-214] ----------ASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMN---D-----T-------------PPAE----RG--VGMVFQ---SYALYPHLSVAENM---SFGLKLAG-------AKKEVINQRVNQVAEVLQ-----LAHLLDRK--P-KA----LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVA-----Q-----VGKPLELYH----YPADRFVAGFI----------------------------------------------------------------------------------------------------------