@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu31150: (2016-07-21 )
MTLWELFVAAILGIVEGLTEYAPVSSTGHMIIVDDIWLKSSNLMSEEAANSFKVVIQLGSILAVAIVFKDRILNLLGLKKNITSDQEQGHKLSIAQIAVGLVPAAVLGFLFEDYIDEYLFSVKTVAIGLIAGAILMLFADWVNKRKTATDTLDRISYKQAIAVGLFQCLSLWPGFSRSGSTISGGVILGLNHRAAADFTFIMAMPIMMGASFLSLVKHWDSLSSDLMPFFIVGFICAFVVALFVVRFFLRLINKIKLVPFAIYRIILGVILLLIMM
Atome Classification :
(20 SA)
----------------------------------------------------------------------.........10......---------------..20.......---.30....----.-...40--......---...50........---60..---......-------------70......-..----80........90...---.....100--.......110------..-.-.....--------120.-----......130-----...------.....140----------------------------------.........--150-.......160---...------------------..---------..--------170........180---.......--------------.190........200.......210.....-.-.220.......----230.......240...----....250.......-------260-----........270......------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----------------------------------------------------------------------M
T
L
W
E
L
F
V
A
A
I
L
G
I
V
E
G
---------------
L
T
EYAPVSSTG---
H
M
I
I
V
D
D
----
I
-WLKS---SNLM
S
E
---EAAN
S
F
K
V
V
I
QLG---
S
I
L
A
---
V
A
I
V
F
K
-------------
D
R
I
L
N
L
LG-LK----KNITS
D
Q
EQG
H
K
L
S
I
---
A
Q
I
A
V
G
L
V
--
P
A
A
V
L
G
F
L
F
-------
E
D
-
Y
-
I
D
E
Y
L
--------
F
S
V
K
-----
T
V
A
I
G
L
I
A
------
G
A
I
------
L
M
L
F
A
D
------------------------------------
W
V
NKRKTAT--
D
T
L
-
D
R
I
S
Y
K
Q
A
I
A
---
V
G
L
------------------
F
Q
---------
C
L
--------
S
L-WPGFSRSGST----IS
G
G
V
I
L
--------------GL-NHRAAAD
F
T
F
I
M
A
M
P
I
M
M
G
A
S
F
L
S
L
V
K
-
H
-
W
D
S
L
SS
D
L
M
P
F
----
F
I
V
G
F
I
C
A
F
V
V
A
L
F
V
V
----
R
F
F
L
R
L
I
N
KIK
L
V
P
-------
F
A
------
I
Y
R
I
I
L
G
V
I
--
L
L
L
I
MM------------------------------------
28
Fugue
56.75
14%
-47
- C3 -
5B02
-
?
A:
[-5-258]
---------------------------------------------------------------------------
K
M
L
A
A
E
A
A
N
R
D
H
---------------
V
T
R
C
V
A
Q
T
G
G
S
---
P
D
L
V
A
H
T
A
A
L
R
L
-
Y
L
R
V
---
P
H
F
L
T
E
WTT
D
P
D
R
R
A
A
V
S
R
A
L
A
---
L
D
I
V
---
S
M
K
L
L
D
-------------
D
L
M
D
D
D
T
G
-
L
D
---------------
R
V
E
L
---
A
C
V
C
L
R
L
H
--
L
R
A
L
H
E
L
E
S
-------
L
--------
A
--------
R
D
P
K
-----
A
V
T
D
I
L
E
Q
------
D
A
V
------
H
L
C
G
G
Q
------------------------------------
I
R
T
K
R
S
R
A
T
--
N
----
L
R
E
W
R
A
H
A
S
---
T
Y
G
------------------
S
T
---------
F
L
--------
G
R
-
Y
G
A
L
A
A
A
C
G
G
----
E
G
Q
---------------------
P
A
D
S
V
R
E
F
A
E
A
F
A
M
T
I
T
M
A
D
D
L
T
D
Y
D
R
-
N
-
G
E
R
-
D
G
N
L
A
H
L
----
M
R
T
G
A
V
A
G
Q
D
V
V
D
L
L
E
----
E
L
R
G
R
A
L
A
A
V
A
A
P
P
-------
G
A
PGL
V
P
V
V
H
L
Y
T
D
D
V
L
V
R
L
L
P
R
H
L
------------------------------------
27
Fugue
51.75
18%
-65
- C3 -
4FDT
2
?
A:
[21-425]
MQT
K
I
Q
K
Y
A
GTAMPYPNRTDGMTPF
Y
I
N
H
L
G
R
H
GARFPTSR
K
A
L
D
K
V
E
K
V
L
V
S
A
Q
Q
E
NGLT
S
E
G
M
A
L
L
S
M
I
R
R
L
S
R
L
F
D
G
Q
W
G
K
L
S
K
---------------
L
G
E
T
E
Q
E
G
I
A
G
---
R
M
I
R
N
Y
P
----
Q
-
L
F
S
N
---
S
A
K
I
E
A
---
I
A
T
Y
V
P
R
S
I
N
S
M
D
---
A
F
L
S
---
C
M
I
R
H
N
PA
L
Q
V
Q
R
S
E
G
KQY
N
H
I
L
R
F
F
D
-
L
N
----
K
S
Y
V
N
Y
K
E
K
G
D
W
L
P
I
---
Y
K
A
F
V
H
K
K
IS
P
V
P
I
M
K
K
F
L
LNPEQYL
D
K
-
E
-
A
E
E
F
V
--------
M
A
L
F
-----
S
V
A
A
I
L
P
D
------
T
S
I
PLNLED
L
F
T
L
D
E
------------------------------------
W
H
R
Y
W
Q
T
Q
N
L
R
Q
Y
M
-
S
K
S
S
A
P
V
G
K
M
---
L
P
V
------------------
A
I
---------
A
W
--------
P
L
-
L
S
E
F
I
R
S
A
Q
E
----
V
I
S
G
--------------------
K
S
D
Y
Q
A
N
F
R
F
A
H
A
E
T
V
I
P
F
V
S
L
M
G
I
E
K
T
D
-
V
Q
V
C
R
P
D
S
V
S
V
YWKD
Y
E
I
S
P
M
A
A
N
V
Q
W
L
F
Y
R
D
RDQ
R
I
W
V
K
I
L
L
N
E
E
A
A
A
L
PISTAC
F
P
------
Y
Y
S
W
E
K
T
R
I
--
F
F
N
Q
R
I
E
M
A
K
K
T
L
S
V
F
N-------------------------
30
Fugue
51.18
13%
-66
- C3 -
4WD8
4
?
A:
[25-292]
----------------------------------------------------------------------
S
K
I
I
F
R
L
L
L
N
V
L
M
S
I
I
A
---------------
I
I
S
Y
Q
W
Y
E
Q
L
G
I
H
L
T
V
A
P
F
S
L
----
L
-
G
I
A
I
---
A
I
F
L
G
F
---
R
N
S
A
S
Y
S
R
F
V
E
A
R
---
N
L
W
G
---
T
V
L
I
A
E
-------------
R
T
L
V
R
Q
L
--------
R
N
I
L
P
A
E
H
D
A
H
R
-
R
I
---
V
S
Y
L
V
A
F
S
--
W
S
L
K
H
Q
L
R
K
-------
T
D
-
P
-
T
A
D
L
R
--------
R
L
L
P
-----
E
E
R
V
T
E
I
L
A
SSM
P
T
N
R
I
------
L
L
L
A
G
N
------------------------------------
E
I
G
Q
L
R
E
A
---
G
K
L
-
S
D
I
T
Y
G
-
L
M
D
---
N
K
L
------------------
D
E
---------
L
A
--------
H
V
-
L
G
G
C
E
R
L
A
T
T
----------------------------
P
V
P
F
A
Y
T
L
I
L
Q
R
T
V
Y
L
F
C
T
L
L
P
F
A
L
V
G
-
D
-
L
H
Y
M
T
P
F
V
S
V
F
----
I
S
Y
T
F
L
S
W
D
S
L
A
E
E
L
E
----
D
P
F
G
T
A
A
N
D
L
P
L
N
---------
A
------
M
C
N
T
I
E
R
N
L
--
L
D
M
T
G
Q
------------------------------------
7
PsiBlast_PDB
50.68
34%
-245
- C5 -
2Y1X
-
CARM1_HUMAN
A:
[285-319]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
50.45
34%
-243
- C5 -
3B3F
-
CARM1_RAT
A:
[281-315]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
50.08
34%
-242
* C5 *
5DX0
1
CARM1_HUMAN
A:
[289-323]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
49.55
34%
-231
- C5 -
3B3G
-
CARM1_RAT
A:
[420-454]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
49.50
34%
-243
- C5 -
5DX8
-
CARM1_HUMAN
A:
[289-323]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
49.49
34%
-242
- C5 -
2Y1W
1
CARM1_HUMAN
A:
[285-319]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
49.45
34%
-240
- C5 -
5DXA
-
CARM1_HUMAN
A:
[289-323]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
49.18
34%
-241
- C5 -
4IKP
1
CARM1_HUMAN
A:
[280-314]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
49.08
34%
-236
- C5 -
5DX1
-
CARM1_HUMAN
A:
[289-323]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
49.07
34%
-230
- C5 -
5DXJ
-
CARM1_HUMAN
A:
[289-323]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
48.43
34%
-231
- C5 -
5DWQ
-
CARM1_HUMAN
A:
[289-323]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
46.93
34%
-234
- C5 -
2V7E
2
CARM1_MOUSE
A:
[276-310]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
46.89
34%
-220
- C5 -
3B3J
2
CARM1_RAT
A:
[393-427]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
46.53
34%
-220
- C5 -
2V74
-
CARM1_MOUSE
B:
[276-310]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---------
C
L
--------
F
Q
-
S
P
L
F
A
K
A
G
D
T
----
L
S
G
T
C
L
L
--------------
I
A
-
N
K
R
Q
S
Y
D
I
S
I
V
----------------------------------------------------------------------------------------------------------------------------------------
33
Fugue
45.30
14%
-36
- C3 -
1KBL
1
PPDK_CLOSY
A:
[1-375]
-------------AKWVYKFEEGNASMRNLLG
G
K
G
C
N
L
A
E
M
T
I
L
GMPIP
Q
G
F
T
VT
T
E
A
C
T
E
Y
Y
N
S
GKQIT
Q
E
I
Q
D
Q
I
F
E
A
I
T
W
L
E
E
L
N
GKKFGDT
E
D
P
L
L
V
S
V
R
S
G
A
R
A
S
M
P
G
---
M
M
D
T
I
L
N
----
L
-
G
L
N
D
---
V
A
V
E
G
F
---
A
K
K
T
G
-
N
P
R
F
A
Y
D
---
S
Y
R
R
---
F
I
Q
M
Y
S
-------------
D
V
V
M
---
E
-
V
P
----
K
S
H
F
E
K
I
I
D
A
M
K
E
E
K
---
G
V
H
F
D
T
D
L
--
T
A
D
D
L
K
E
L
A
-------
E
K
-
F
-
K
A
V
Y
K
--------
E
A
M
N
GEEFP
Q
E
P
K
D
Q
L
M
------
G
A
V
------
K
A
V
F
R
S
------------------------------------
W
D
N
P
R
A
I
V
Y
--
R
R
M
-
N
D
I
P
G
D
W
G
T
A
---
V
N
V
------------------
Q
T
---------
M
V
F
GNKGET
S
G
T
-
G
V
A
F
T
R
N
P
S
T
GEKG
I
Y
G
E
Y
L
I
--------------
N
A
Q
G
E
D
V
V
A
G
V
R
T
P
Q
P
I
T
Q
-----------------------------
L
E
N
D
M
P
D
C
Y
K
Q
F
M
D
L
A
----
M
K
L
E
K
H
F
R
D
M
Q
D
M
E
-------
F
T
------
I
E
E
G
K
L
Y
F
L
--
Q
T
R
N
G
K
R
T
A
P
A
A
L
Q
I
A
C
D
L
V
D
E
GMIT
E
E
E
A
V
V
R
IEAKSLDQL
26
Fugue
36.76
15%
-5
- C2 -
3ZX7
12
TXL_EISFE
A:
[5-300]
----------------------------------------------------------------------
A
E
G
Y
E
Q
I
E
V
D
V
V
A
V
W
K
E
G
Y
-------------
V
Y
E
N
R
G
S
T
S
V
D
---
Q
K
I
T
I
T
K
----
G
M
K
N
V
N
---
S
E
T
R
T
V
---
T
A
T
H
S
I
G
S
T
I
S
T
G
D
A
F
E
I
G
S
---
V
E
V
S
Y
S
H
------------
S
H
E
E
S
Q
V
S
M
T
E
----
T
E
V
Y
E
S
K
V
I
E
H
T
I
T
I
P
P
T
S
K
F
T
R
W
Q
L
--
N
A
D
V
G
G
A
D
I
-------
E
Y
M
Y
L
I
D
E
V
T
P
IG
G
T
Q
S
I
P
Q
V
I
-----
T
S
R
A
K
I
I
V
------
G
R
Q
------
I
I
L
G
K
T
------------------------------------
E
I
R
I
K
H
A
E
R
--
K
E
Y
M
T
V
V
S
R
K
S
W
P
A
---
A
T
L
G
HSKL
F
K
F
V
L
Y
E
D
WG
G
F
R
I
K
---------
T
L
--------
N
T
M
Y
S
G
Y
E
Y
A
Y
S
S
----
D
Q
G
G
I
Y
F
--------------
D
Q
G
T
D
N
P
K
Q
R
W
A
I
N
K
S
L
P
L
R
H
G
----
D
V
V
T
-
F
M
N
K
Y
F
T
R
S
G
L
C
Y
----
D
D
G
P
A
T
N
V
Y
C
L
D
K
R
E
D
----
K
W
I
L
E
V
V
G
L
V
P
R
----------------------------------------------------------------------
25
Fugue
33.36
16%
-3
- C3 -
3WPA
1
?
A:
[65-410]
---------------------------------------------------------------NVAQGNQ
T
N
V
G
D
A
L
T
A
L
D
N
A
I
N
T
A
---------------
A
T
T
S
K
S
T
V
S
N
G
---
Q
N
I
V
V
S
K
----
S
-
K
N
A
D
G
S
D
N
Y
E
V
S
T
---
A
K
D
L
T
V
D
S
V
K
A
G
D
---
T
V
L
N
NAG
I
T
I
G
N
N
-------------
A
V
V
L
N
N
T
G
-
L
T
I
S
G
G
P
S
V
T
L
A
G
I
D
A
G
N
K
T
I
---
Q
N
V
A
N
A
V
N
--
A
T
D
A
V
N
----------
K
G
-
Q
-
L
D
S
A
I
--------
N
N
V
N
-----
N
N
V
N
E
L
A
N
------
N
A
V
------
K
Y
D
D
A
S
KD
K
I
T
L
GGGAT
G
T
T
I
T
NVKDGTVAQGSK
D
A
V
N
G
G
Q
L
W
N
V
Q
Q
Q
V
D
Q
--
N
T
T
-
D
I
S
N
I
K
N
D
I
N
N
GT
V
G
L
------------------
V
Q
QAGKD
A
P
V
T
V
A
--------
K
D
-
T
G
G
T
T
V
N
V
A
G
----
T
D
G
N
R
V
V
T
GVKEGAVNATSK
D
A
V
-
N
G
S
Q
L
N
T
T
N
Q
A
V
V
N
Y
L
G
G
G
A
G
Y
D
N
I
T
G
-
S
-
F
T
A
P
S
Y
T
V
G
D
S
----
K
Y
N
N
V
G
G
A
I
D
A
L
N
Q
A
D
----
Q
A
L
N
S
K
I
D
N
V
S
N
K
L
-------
D
N
------
A
F
R
I
T
N
N
R
I
--------------------------------------------