@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu40020: (2016-08-06 )
MQQACIAIIIILLTVAAYLAMVKLYKRFPLPFLIPVLTTTILIVAALMMFHVSYEGYMIGGKWINSLLGPAVVALAYPLYKQWHIIVKHCVPILGGVLVGLCMGMISGLIFAEAFGIDHDLLLSILPKSITTPVAIQIAAGLGGVPSMTVVFVMIAGFSGVILGPLFLKWLRIRSSLGQGIALGSASHALGTSKALEYGELAVSMSSVSMTLCAVLGSFFGPLVVWLFHI
Atome Classification :
(20 SA)
------------------.........10.-----..------.....20-...-....-.--.30.....-...------40..--......50......-.-----------.------60...-......70.-.......-80.........90...-....-----.-100.......110--..-..-----.-.---.--120...----.----..-.----..130.........--140.----------------.-..----...150.......160.-.--------------..-.-..-.-170....-.------.-.180..----.------...-..--------.190.........200.......210-.---........220.---......230-
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
------------------MQ
Q
A
C
I
A
I
I
I
I
L
-----
L
T
------
V
A
A
Y
L
A
--
M
V
K
-
L
Y
K
R-F--P
L
P
F
L
I
P
V
-
L
T
T
------
T
I
L
I
--
V
A
A
L
M
M
F
HVSYE
G
Y
-
M
-----------I------
G
-
G
K
W
-
I
N
S
L
L
G
P
A
V
-
V
A
L
A
Y
P
L
-
Y
-
K
Q
W
H
I
I
V
K
H
C
V
P
I
L
-
G
G
V
L
-----
V
-
G
L
C
M
G
M
I
S
G
L
I
F
A
--
E
A
-FG-----I-
D
---
H
--
D
--
L
L
L
----
S
----
I
L-P----KSI--TT
P
V
A
I
Q
I
A--AGLG----------------G-V
P
----
S
M
T
V
V
F
V
M
IAGFSG-V
I
-
L
--------------
G
P
-
L
-
F
L
-
K
-
W
L
R
I
R
S
S-L------G-Q
G
--
I
A----L------GSA-SH--------AL--GT
S
K
A
L
E
Y
G
E
L
A
V
S
M
S
S
V
S
M
---
T
---
L
C
A
V
L
G
S
F
F
G
P
L
---
V
V
W
LFHI---
33
Fugue
69.65
16%
-58
- C- -
3WOZ
-
CLAP2_MOUSE
A:
[645-869]
TED
V
A
E
V
L
N
R
C
A
SSN
W
S
E
R
K
E
G
L
L
G
L
Q
N
L
L
K
N
QRT
L
S
------
R
I
E
L
K
R
--
L
C
E
-
I
F
T
R
M
F
--
A
D
P
H
--
G
K
-
V
F
S
M
-----
F
L
E
T
--
L
V
D
F
I
Q
V
H
K
D
D
---------------------------------
L
Q
D
W
L
-
F
V
L
L
T
Q
L
-
L
-
K
K
------------
M
G
A
D
L
-----
L
-
G
S
V
Q
A
K
V
Q
K
A
L
D
I
--
T
R
-
E
S
-----
F
-
P
---
N
--
D
--
L
Q
F
----
N
----
I
L
M
R
----
F
T
V
--
D
Q
T
----------------------------
Q
-
T
P
----
S
L
K
V
K
V
A
I
L
K
Y
I
E
T
-
L
A
K
Q
M-------------
D
P
-
R
D
F
T
-
N
-
S
S
E
T
R
L
A
-
V
------
S
-
R
V
--
I
T
----
W
------
T
T
E
-
P
K
S-------
S
D
--
V
R
K
A
A
Q
S
V
L
I
S
L
F
E
L
N
T
P
E
F
---
T
M
--
L
L
G
A
L
P
K
T
F
Q
D
G
---
A
T
K
L
L
H
N
---
35
Fugue
67.20
17%
-90
- C3 -
4RGP
6
?
A:
[2-256]
------------------
N
A
T
E
Q
E
T
L
T
I
L
L
-----
D
V
------
Y
A
Y
Y
Q
A
Y
Q
I
V
K
-
A
S
Q
F
-
F
S
D
D
I
I
F
L
L
E
L
-
L
K
E
R
R
E
LNV
D
F
L
F
Q
N
Q
V
H
L
Q
E
L
E
L
T
Y
H
I
S
-
L
-----------
L
------
D
-
N
A
Y
-
E
E
E
L
L
A
N
Y
I
M
D
L
E
A
K
L
R
-
N
-
D
H
I
I
D
F
V
R
S
V
S
P
I
L
-
Y
R
L
L
M
R
---
L
M
Q
S
Q
V
A
D
I
N
D
Y
I
Y
---
D
A
-
K
N
-----
D
-
Q
---
Y
--
D
--
T
W
K
----
F
----
D
K
M
H
----
D
S
A
--
N
P
F
V
Q
N
F
V
A
--
K
G
R
D
----------------
S
K
I
T
----
S
R
S
L
A
D
F
I
Q
L
T
D
L
P
-
Q
A
-
I
--------------
K
D
-
N
-
I
L
-
L
-
L
R
D
F
E
K
S
-
V
------
R
-
N
P
--
L
A
----
H
LIKPFD
E
E
E
-
L
H
--------
R
T
--
T
G
F
S
S
Q
T
F
L
E
K
I
I
Q
L
A
V
F
S
G
---
I
---
H
Y
D
N
D
K
F
Y
F
D
K
V
---
N
E
L
I
K
R
I
Y
Q-
36
Fugue
65.80
20%
-71
* C6 *
4JYJ
1
?
A:
[27-296]
-------------DG
V
R
L
E
E
G
D
A
I
D
W
I
V
F
D
-----
R
P
------
Q
A
A
N
S
F
--
S
A
T
-
L
L
E
Q
-
F
--
S
A
L
V
K
D
R
Q
-
A
N
G
-------------
A
P
V
L
G
I
R
G
S
G
R
G
F
-
S
-----------
S
------
G
M
D
L
G
E
Y
N
A
T
S
G
P
T
S
-
D
V
L
R
L
S
S
-
Y
V
E
R
W
L
D
L
W
R
H
P
K
P
V
I
-
V
A
V
H
GYCIG
V
-
A
A
Q
L
A
S
F
A
D
I
L
V
V
A
E
D
A
M
I
S
E
PTIP
I
-
G
---
G
--
G
--
F
I
A
----
P
----
T
W
-
V
----
S
H
V
--
G
S
R
H
A
K
E
F
A
--
F
L
P
G
N
R
I
D
G
R
M
A
A
A
W
GWANC
A
-
V
P
----
A
S
E
V
I
A
C
C
E
S
L
A
Q
R
M
K
L
M
P
--------------
P
A
-
V
-
L
A
M
K
-
K
R
S
I
N
R
A
M
E
------
A
-
A
G
--------
F
------
H
A
A
-
A
S
--------
A
I
--
A
E
S
D
A
L
L
H
L
E
P
E
V
T
A
I
R
N
R
L
---
R
T
ED
L
K
A
V
V
G
S
Y
A
G
E
S
---
S
Q
E
I
F
Q
R
H
GG
37
Fugue
63.15
20%
-75
- C6 -
2AXO
-
?
A:
[38-266]
------------------
A
Q
E
A
V
K
G
V
V
E
L
F
-----
T
S
QGCASC
P
P
A
D
E
A
--
L
R
K
M
I
Q
K
G
-
D
---------------------------
V
V
G
L
S
Y
H
V
D
Y
W
N
Y
-
L
---------------------
G
W
-
T
D
S
L
A
S
K
E
N
-
T
E
R
Q
Y
G
Y
M
R
-
A
L
G
R
N
G
V
Y
T
P
Q
A
I
L
-
N
G
R
--------
D
H
V
K
G
A
D
V
R
G
I
Y
D
--
R
L
-
D
A
-----
F
-
K
R
E
G
Q
--
G
--
L
N
V
----
P
----
V
S
-
S
----
K
F
A
--
G
D
E
V
E
I
D
I
G
--
A
G
N
G
----------------
K
-
A
-------
D
V
V
V
A
Y
F
T
R
E
Q
T
-
V
D
-
V
--------------
K
K
M
S
-
Y
W
-
H
-
S
V
Y
D
V
Q
T
-
V
------
G
M
W
D
---------------
G
S
P
M
T
V
--------
K
L
P
A
S
V
V
A
K
V
K
K
G
G
C
A
V
L
L
Q
T
A
N
A
SGD
P
---
A
A
I
V
G
A
S
I
L
L
G
N
---
E
T
Q
L
E
H
H
---
20
HHSearch
57.36
10%
-179
- C5 -
3ZUX
8
?
A:
[68-155]
--------------------------------------------------------------------------------------------------------------------------------------------------------
L
F
K
H
P
K
V
V
I
-
I
G
V
I
-----
A
-
Q
F
A
I
M
P
A
T
A
W
C
L
S
--
K
L
-
L
N
-----
L
-
P
---
A
--
E
--
I
A
V
----
G
----
V
I
-
L
----
V
G
C
CP
G
G
T
A
S
N
V
M
T
--
Y
L
A
R
----------------
G
-
N
V
----
A
L
S
V
A
V
T
S
V
S
T
L
T
S
-
P
L
-
L
--------------
T
P
-
A
-
I
F
-
L
-
M
L
------------------------------------------------------------------------------------------------------
30
Fugue
56.79
11%
-154
- C7 -
3EBK
-
BLG4_BLAGE
A:
[7-176]
-------------------
N
E
D
C
F
R
H
E
S
L
V
-----
P
N
------
L
D
-----------
Y
E
R
-
F
--
R
G
S
W
I
I
A
A
-
G
T
S
------
E
A
L
T
--
Q
Y
K
C
W
I
D
R
F
S
Y
D
D
A
-
L
-----------
V
------
S
--
K
Y
-
T
D
S
Q
G
K
N
R
T
-
T
I
R
G
R
T
K
-
F
-
E
G
N
K
F
T
I
D
Y
--------------------------------
N
D
-
K
G
-----
K
-
A
---
F
--
S
--
A
P
Y
----
S
----
V
L
-
A
----
T
D
Y
--
E
N
------------------------------------------
Y
A
I
V
E
G
C
P
A
-
A
A
-
N
--------------
G
----
H
V
-
I
-
Y
V
Q
L
R
M
T
-
L
------
R
-
R
---
F
H
----
P
------
K
M
L
-
Q
H
--------
Y
T
--
L
D
Q
V
N
Q
N
K
K
A
I
E
E
D
L
K
H
F
N
L
---
K
---
Y
E
D
L
H
S
T
C
H
----------------
19
HHSearch
55.06
14%
-156
- C5 -
4N7W
1
?
A:
[58-144]
---------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
R
P
A
P
V
A
-
A
A
T
F
-----
L
-
H
Y
L
I
M
P
L
T
A
W
I
L
A
--
M
L
-
F
R
-----
M
-
P
---
P
--
D
--
L
S
A
----
G
----
M
V
-
L
----
V
G
S
VA
S
G
T
A
S
N
V
M
I
--
Y
L
A
K
----------------
G
-
D
V
----
A
L
S
V
T
I
S
A
V
S
T
L
V
G
-
V
F
-
A
--------------
T
P
-
L
-
L
T
-
R
-
L
Y
------------------------------------------------------------------------------------------------------
22
HHSearch
54.34
18%
-114
- C5 -
2ZY9
1
MGTE_THET8
A:
[308-459]
---------------------------------------------------------------
R
V
R
W
L
V
I
L
-
I
L
T
------
G
M
V
T
--
S
S
I
L
Q
G
F
E
S
V
L
E
A
V
-
T
ALAFY
V
P
V
L
L
G
T
------
G
-
G
N
T
-
G
N
Q
S
A
T
L
I
I
-
R
A
L
A
T
R
D
-
L
-
D
L
R
D
W
R
R
V
F
L
K
E
M
G
-
V
G
L
L
-----
L
-
G
L
T
L
S
F
L
L
V
G
K
V
Y
---
W
-
D
G
--------------------------------------------------
H
--
P
L
L
L
----------------
P
-
V
V
----
G
V
S
L
V
L
I
V
F
F
A
N
L
V
-
G
A
-
M
--------------
L
P
-
F
-
L
L
-
R
-
R
L
G
V
D
P
A
-
L
------
V
-
S
N
--
P
L
----
V
------
A
T
L
-
S
D
--------
V
T
--
G
L
--------------------------------------------------
17
PsiBlast_CBE
53.99
31%
-100
- C5 -
3FPC
8
ADH1_ENTHI (first)
B:
[104-211]
------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
M
L
-----
A
-
G
W
K
F
S
N
V
K
D
G
V
F
G
--
E
F
-
F
H
-----
V
N
D
---
A
--
D
--
M
N
L
----
A
----
H
L
-
P
----
K
E
I
--
P
L
E
A
A
V
M
I
--------------------------
P
----
D
M
-----
M
T
T
G
F
H
G
-
A
E
-
L
ANIKLGDTVCVIGI
G
P
-
V
-
G
L
-
M
-
S
V
A
G
A
N
H
-
L
------
G
-
A
G
RI
F
A
----
V
------
G
S
R
-
K
H
--------
C
C
--
D
I
--
A
L
E
Y
G
-------------------------------------------
16
PsiBlast_CBE
53.91
31%
-92
- C5 -
3FPC
7
ADH1_ENTHI (first)
C:
[104-211]
------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
M
L
-----
A
-
G
W
K
F
S
N
V
K
D
G
V
F
G
--
E
F
-
F
H
-----
V
N
D
---
A
--
D
--
M
N
L
----
A
----
H
L
-
P
----
K
E
I
--
P
L
E
A
A
V
M
I
--------------------------
P
----
D
M
-----
M
T
T
G
F
H
G
-
A
E
-
L
ANIKLGDTVCVIGI
G
P
-
V
-
G
L
-
M
-
S
V
A
G
A
N
H
-
L
------
G
-
A
G
RI
F
A
----
V
------
G
S
R
-
K
H
--------
C
C
--
D
I
--
A
L
E
Y
G
-------------------------------------------
15
PsiBlast_CBE
53.65
31%
-96
- C5 -
3FPC
6
ADH1_ENTHI (first)
D:
[104-211]
------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
M
L
-----
A
-
G
W
K
F
S
N
V
K
D
G
V
F
G
--
E
F
-
F
H
-----
V
N
D
---
A
--
D
--
M
N
L
----
A
----
H
L
-
P
----
K
E
I
--
P
L
E
A
A
V
M
I
--------------------------
P
----
D
M
-----
M
T
T
G
F
H
G
-
A
E
-
L
ANIKLGDTVCVIGI
G
P
-
V
-
G
L
-
M
-
S
V
A
G
A
N
H
-
L
------
G
-
A
G
RI
F
A
----
V
------
G
S
R
-
K
H
--------
C
C
--
D
I
--
A
L
E
Y
G
-------------------------------------------
6
PsiBlast_PDB
53.49
31%
-98
- C5 -
3FPC
3
ADH1_ENTHI (first)
A:
[104-211]
------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
M
L
-----
A
-
G
W
K
F
S
N
V
K
D
G
V
F
G
--
E
F
-
F
H
-----
V
N
D
---
A
--
D
--
M
N
L
----
A
----
H
L
-
P
----
K
E
I
--
P
L
E
A
A
V
M
I
--------------------------
P
----
D
M
-----
M
T
T
G
F
H
G
-
A
E
-
L
A
NIKLG
D
T
V
C
V
I
G
I
G
P
-
V
-
G
L
-
M
-
S
V
A
G
A
N
H
-
L
------
G
-
A
G
R
I
F
A
----
V
------
G
S
R
-
K
H
--------
C
C
--
D
I
--
A
L
E
Y
G
-------------------------------------------
24
HHSearch
53.29
11%
-167
- C5 -
4N7W
2
?
A:
[209-303]
-----------------------------------------------------------------------------------------------------------------------------------------------------
Q
S
H
I
A
S
V
G
F
V
V
I
-
I
A
V
I
-----
L
-
H
N
G
I
G
L
L
S
G
Y
W
G
G
--
K
L
-
F
G
-----
F
-
D
---
E
--
S
--
T
C
R
----
T
L
A
I
E
V
G
-
M
----
Q
N
S
--
G
L
A
--
A
T
L
G
--
K
I
Y
F
----------------
S
-------
P
L
A
A
L
P
G
A
L
F
S
V
W
H
-
N
L
-
S
--------------
G
S
-
L
-
L
A
-
G
-
Y
W
S
G
K
P
V
-
K
-----------------------------------------------------------------------------------------------
21
HHSearch
51.94
15%
-163
- C5 -
3ZUX
8
?
A:
[218-313]
---------------------------------------------------------------------------------------------------------------------------------------------------
A
S
K
G
K
I
M
E
S
G
L
L
I
F
-
A
V
V
V
-----
L
-
H
N
G
I
G
Y
L
L
G
F
F
A
A
--
K
W
-
T
G
-----
L
-
P
---
Y
--
D
--
A
Q
K
----
A
----
L
T
-
I
E
V
G
M
Q
N
S
--
G
L
A
A
A
L
A
A
A
---
H
F
A
----------------
A
-
A
-----
P
V
V
A
V
P
G
A
L
F
S
V
W
H
-
N
I
-
S
--------------
G
S
-
L
-
L
A
-
T
-
Y
W
A
A
K
---------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
47.84
31%
-156
- C8 -
3J27
-
POLG_DEN2N
A:
[381-457]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
-
V
E
-
P
--------------
G
Q
-
L
-
K
L
-
N
-
W
F
K
K
G
S
S
-
I
------
G
-
Q
M
--
I
E
T
T
M
-
R
------
G
A
K
-
R
M
--------
A
I
--
L
G
D
T
A
W
D
F
G
S
L
G
G
V
F
T
S
I
G
K
---
A
---
L
H
Q
V
F
G
A
I
Y
G
A
A
FSG
V
S
W
I
M
K
I
---
26
HHSearch
47.61
13%
-197
* C5 *
5BZ3
4
?
A:
[68-138]
-------------------------------------------------------------------------------------------------------------------------------------------
F
M
V
G
L
-
E
-
T
R
L
K
D
I
L
A
V
G
K
E
A
F
-
L
V
A
V
-----
L
-
G
V
A
L
P
F
L
G
G
Y
L
Y
G
--
L
E
-
I
G
-----
F
-
E
---
T
--
L
P
A
L
F
L
----
G
----
T
A
-
L
----
V
A
T
--
S
V
G
I
T
A
R
V
L
--
Q
E
L
G
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
47.03
34%
-110
- C9 -
3HD0
-
NFI_THEMA
A:
[76-144]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
F
P
Y
I
P
G
L
L
A
-
F
R
-
E
--------------
G
P
-
L
-
F
L
-
K
A
W
E
K
L
R
T
K
-
P
D
V
V
V
F
D
G
-
Q
G
--
L
A
HPRK
L
------
G
I
A
-
S
H
M
G
L
F
I
E
I
P
T
I
--
G
V
A
K
S
R
L
Y
G
-------------------------------------------
2
PsiBlast_PDB
46.43
31%
-150
- C8 -
3J2P
-
?
A:
[381-457]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
-
V
E
-
P
--------------
G
Q
-
L
-
K
L
-
N
-
W
F
K
K
G
S
S
-
I
------
G
-
Q
M
--
I
E
T
T
M
-
R
------
G
A
K
-
R
M
--------
A
I
--
L
G
D
T
A
W
D
F
G
S
L
G
G
V
F
T
S
I
G
K
---
A
---
L
H
Q
V
F
G
A
I
Y
G
A
A
FSG
V
S
W
I
M
K
I
---
9
PsiBlast_PDB
45.46
34%
-95
- C9 -
2W36
2
NFI_THEMA
A:
[76-144]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
F
P
Y
I
P
G
L
L
A
-
F
R
-
E
--------------
G
P
-
L
-
F
L
-
K
A
W
E
K
L
R
T
K
-
P
D
V
V
V
F
D
G
-
Q
G
--
L
A
HPRK
L
------
G
I
A
-
S
H
M
G
L
F
I
E
I
P
T
I
--
G
V
A
K
S
R
L
Y
G
-------------------------------------------
18
HHSearch
45.17
12%
-158
- C5 -
5A1S
7
?
A:
[79-235]
-------------------------------------------------------------------
I
G
G
A
P
V
M
I
------
F
L
V
A
--
A
Y
F
V
Y
A
G
I
F
T
-
Q
K
E
I
D
-----------
A
I
S
N
V
M
D
K
-
S
N
F
-
L
N
L
F
I
A
V
L
I
-
T
G
A
I
L
S
V
----
N
R
K
L
L
L
K
S
L
L
G
Y
I
-
P
T
I
L
-----
A
-
G
I
V
G
A
S
L
F
G
I
V
I
G
--
L
C
-
F
G
-----
I
-
P
---
V
D
R
I
--
M
M
L
Y
V
L
P
I
----
M
G
-
G
----
G
N
G
--
A
G
A
V
P
L
S
E
I
Y
H
S
V
T
G
----------------
R
-
S
R
E
E
Y
Y
S
T
A
I
A
I
L
T
I
A
N
I
F
A
-
I
I
-
F
--------------
A
--
A
-
L
L
-
D
-
M
V
G
K
----------------------------------------------------------------------------------------------------