@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA0072: (2015-12-20 )
MRAGLLLSLAWADYRGEARLSLCAIFALAAVITPLLVLFGLKYGLVSTLTERLERAPSVREIIPVGGARYRAEDIAALAARADVAFAVPRTRQIAATADLSGGGETALSVEMIPSAAGDPLLAGLPQPDRPTRVVLSHGAAEKLGAQPGERIVARIGRRMDGQAQSQRLELEVLAVLPQERFARDALFAPLALLEAAEDYRDGRAVAAYGWPGKAGETPRARIYPGFRLYARDLDAVEGLRRHFVASGVEVATQAEAIAQVRSLSRNLGLVFWIVAALAIGGAFAAIAASSLAAVERKRRALAVLRLLGFPTAALVGFVMLLALFSAVFGLFLAGLLYAATAGALNHLFDNQSGEFVCRLLPSHYLTALLATLLCSVLAAASGGWRAARIEAAEGLRDV
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------------.........10..-------------------......20..----......30....---.------------------...40....-----....50...--..----------------------...60...-...------..70----------.........80..----....----.----------.90..---------......100.---------.----.....110..----------.....120......-.130---.......---------------140....---...150--.....--..160.......170......------.180---....----------------------------...190.......200..-----....---------.210.......220.......230....--.-..240---.......-..250--..-------.....260--.........270..-....-------.--..280.......290--....--------------....300.----....----..310.----..-....---320.-----------.----..----.-..330.---------...---...340.......350-.-......360.........370----..----.......380..--------------.....390.......---------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------MRA
G
L
L
L
S
L
A
WAD-------------------YRG
E
A
R
L
S
L
C
----
A
I
F
A
L
A
A
V
I
T
P
L
---
L
------------------
V
L
F
G
L
K
Y
G
L
-----
V
S
T
L
T
E
R
L
E
--RA----------------------PS
V
R
E
I
IP-VGG------ARY-----------
R
A
E
D
I
A
A
L
A
ARA
D
----
V
A
F
A----V----------PR
T
R
Q
---------
I
A
A
TADLSGG---------G----
E
T
A
L
S
V
E
MIP----------SAAGD
P
L
LAGLPQP-DRP
T
---
R
V
V
LSHG---------------
A
A
E
K
LGA---QP
G
E
R
I
--
V
A
R
I
G
--RRMDGQ
A
Q
S
Q
R
L
E
L
E
V
L
A
VL
P
------
Q
E
R
F
---
A
R
D
A
----------------------------
L
F
A
P
L
A
L
L
E
A
A
E
D
YRDG
R
-----
A
V
A
A
---------YGWPGKAGETPR
A
R
IYPG
F
R
L
Y
A
R
D
L
D
A
--
V
-
E
G
L
-----
R
R
H
F
V
AS-G
V
E
V
A
--
T
Q
-------
A
E
A
I
A
Q
----
V
R
S
L
S
RN
L
G
L
--
V
F
-
W
I
V
A
-------
A
--
L
A
IG
G
A
F
A
A
I
A
A
S
S
---
L
A
A
V
--------------
E
R
K
R
R
A
L
A
----
V
L
R
L
----LGF
P
T
A
----
A
L
-
V
G
F
V
---
M
L
L
A
-----------
L
----
F
S
----
A
-
V
F
G
L
F
L
---------
A
G
L
---
L
Y
A
A
T
A
G
A
L
N
H
L
FDNQ-S-G
E
F
V
C
R
L
--
L
P
S
H
Y
L
T
A
L
L
------
A
T
----
L
L
C
S
V
L
A
AASGG--------------W
R
A
A
R
I
E
A
A
EGLRDV---------------------------------------
39
Fugue
76.53
18%
-89
* C2 *
4INO
-
?
A:
[1-302]
-------------------------------------------------------------------------------------------------------------
Q
E
V
K
V
K
D
-------------------
Y
F
G
E
Q
T
I
K
L
------------
P
V
S
K
I
---
I
------------------
Y
L
G
S
--
F
A
E
-----
V
P
A
M
F
H
T
W
D
--
R
--------------------------------------------------------
V
V
G
I
S
D
Y
A
F
K
S
D
----
I
V
K
A
----
T
----------
L
K
D
P
E
---------
R
I
--
K
P
M
S
S
D
---------
H
----
A
A
A
L
N
V
E
L
L
K
----------
K
L
S
P
D
L
V
V
T
F
V
G
N
P
-
K
A
V
E
---
H
A
K
K
F
G
I
---------------
S
F
L
S
F
Q
-------
E
K
T
--
I
A
E
V
M
--
E
D
I
D
T
Q
A
K
A
--
L
E
V
D
A
S
K
K
L
A
------
K
M
Q
E
---
T
L
D
F
----------------------------
I
A
E
R
L
------
K
G
V
K
K
K
K
-----
G
V
E
L
---------
F
--------
H
K
A
N
K
I
S
G
H
Q
A
L
D
S
D
I
L
E
K
G
G
I
-
D
N
F
-----
G
L
K
Y
V
K
F
-
G
R
A
D
I
--
S
V
-------
E
K
I
V
K
E
----------
N
P
E
I
--
I
F
I
W
W
I
S
-------
P
--
L
S
P
E
D
V
L
N
N
P
K
F
A
T
---
I
K
A
I
--------------
K
N
K
Q
--------
V
Y
K
L
P
TMD
I
G
G
P
R
A
----
P
L
-
I
S
L
F
---
I
A
L
K
-----------
A
----
H
P
----
E
-
A
F
K
------------
G
V
D
---
I
N
A
I
V
K
D
Y
Y
K
V
V
F
D
--------------
L
N
D
A
E
V
E
P
F
L
--------------------------------------
W
H
----------------------------------------------------
37
Fugue
64.81
14%
-89
- C4 -
4WGV
-
?
A:
[5-399]
----------------------------------------------------------------------------------------------------VGY
M
D
P
G
N
W
I
T
S
M
Q
G
G
-------------------
A
Q
--
Y
G
Y
T
L
L
----
F
V
I
L
I
S
S
L
A
A
M
L
---
L
------------------
Q
S
M
T
V
R
L
G
I
A
T
GKD
L
A
Q
M
T
R
H
F
L
--
S
K
----------------------
P
V
A
I
I
F
W
I
-
I
A
E
------
L
A
I
-----------
I
A
T
D
I
A
E
V
I
G
S
A
-----
I
A
L
D
----
L
----------
I
F
G
I
P
---------
L
I
V
G
A
L
I
------------------
T
V
F
D
V
F
L
L
L
----------
F
I
M
R
F
G
F
R
K
I
E
A
I
V
-
G
T
L
I
---
F
T
V
L
A
I
F
---------------
V
F
E
V
F
I
S
---
S
P
--------
Q
L
T
--
D
I
L
N
G
F
V
P
H
K
E
-------
I
V
T
------
N
Q
G
I
---
L
Y
I
A
----------------------------
L
G
I
I
G
A
T
I
M
P
H
N
L
Y
L
H
S
S
-----
I
V
Q
S
---------
R
K
Y
D
R
H
D
N
E
E
K
A
Q
A
I
K
Y
A
T
I
D
S
N
L
Q
L
S
I
--
A
-
F
V
V
-----
N
C
L
L
L
T
L
-
G
A
A
L
F
FG
T
K
-------
T
N
D
L
G
G
----
F
Y
D
L
Y
H
A
L
K
T
EP
V
L
-
G
A
T
L
-------
G
--
G
V
M
S
T
L
F
A
V
A
L
L
A
S
---
G
Q
N
S
--------------
T
I
T
G
T
L
A
G
----
Q
I
V
M
----
E
G
F
L
R
L
----
S
I
P
N
W
L
R
---
R
L
I
T
-----------
R
----
S
L
----
A
-
V
I
P
V
I
I
---------
C
L
I
---
I
F
K
G
N
S
E
K
I
E
Q
L
L
-
V
F
-
S
-
Q
V
F
L
S
I
A
--
L
P
F
S
L
I
P
L
Q
L
------
A
T
S
N
KK
L
M
G
P
F
I
N
K
T
W
V
N
--------------
I
I
S
W
T
L
I
V
I
L
S
G
L
N
V
Y--------------------------------------
40
Fugue
63.75
16%
-88
- C2 -
4R12
6
?
A:
[15-587]
------------------------------------------------------YTTLYSSYPC
T
K
I
M
T
SD
G
Q
F
G
C
S
S
K
HG
G
N
S
G
I
LYLIDD
D
E
S
Y
N
N
Y
F
S
YS
Q
Q
K
D
I
I
V
V
L
D
T
N
Y
-------------------
F
N
S
T
S
V
L
N
L
H
----
N
K
S
K
I
E
G
I
I
V
L
T
---
D
------------------
T
K
K
T
Y
P
Y
S
P
-----
D
S
R
Y
P
N
K
I
Y
GL
Y
P
----------------------
N
S
N
L
E
W
N
P
N
A
D
G
------
F
T
Y
-----------
F
S
F
P
F
P
I
F
A
I
D
N
Q
----
T
S
V
A
----
I
----------
R
N
V
S
K
H
N
RDGQYP
A
W
G
A
E
L
D
S
F
M
Q
---------
G
AIN
S
E
T
C
L
R
R
G
F
C
E
----------
P
V
G
G
Q
S
I
W
S
S
F
S
S
K
I
D
K
E
K
---
E
I
I
L
V
M
L
PF
D
T
T
A
FF-------
R
D
L
S
I
G
A
D--
Q
S
S
F
A
T
--
V
T
L
L
S
V
I
K
S
L
A
A
V
D
R
S
S
W
N
K
E
V
V
F
A
F
W
N
------
A
E
R
W
GY
V
G
S
E
Y
----------------------------
F
I
N
D
L
L
N
F
Q
C
K
T
Y
N
S
D
K
S
KCIDP
P
R
A
D
---------
L
A
F
Q
T
Q
I
N
F
T
K
I
S
T
I
I
E
L
N
Q
I
G
R
A
Q
L
D
K
--
N
-
L
G
K
-----
Y
S
L
Y
L
H
T
A
G
T
K
T
S
--
S
V
-------
T
D
I
L
D
Q
----
V
A
S
S
Y
E
N
S
T
I
--
T
F
-
K
P
T
T
-------
Q
TE
L
P
P
S
S
S
M
S
F
L
K
K
T
N
K
I
P
V
V
V
I
T
DHDYKYSNPYYGY
E
Q
D
D
N
E
N
V
----
L
G
S
T
----
L
N
D
I
V
Y
----
I
L
-
S
T
F
I
---
D
R
I
A
GGNNNITID
K
N
F
----
I
N
----
I
-
L
Y
P
C
F
T
---------
S
S
I
TCF
N
I
L
M
K
T
Y
P
L
N
E
V
P
N
F
Y
-
S
-
S
V
F
G
T
S
L
T
T
T
L
S
P
Y
E
T
K
L
I
------
H
R
----
L
L
Y
S
I
T
Q
Y
N
S
T
L
TNCTSDNDCPS
S
L
C
Y
S
G
Q
C
V
S
S
N
T
H
L
H
N
A
L
S
LG
F
D
F
D
TSKN
V
W
K
I
VNSS
Y
P
I
F
T
E
S
N
W
D
Y
T
A
L
K
V
F
K
I
32
Fugue
58.76
16%
-98
* C6 *
1D2M
4
UVRB_THET8
A:
[2-583]
------------------------------------------------------------------------------------------TFRYRGPSPKGD
Q
P
K
A
I
A
G
L
V
E
A
L
R
D
-------------------
G
E
R
F
V
T
L
L
G
A
TGTG
K
T
V
T
M
A
K
V
I
E
A
L
G
R
P
A
------------------
L
V
L
A
P
N
K
I
L
-----
A
A
Q
L
A
A
E
F
R
--
E
L
F
P
E
N
A
V
E
Y
FISYYDYYQ
P
E
A
Y
V
P
G
K
D
L
Y
I
E
-
K
D
A
SINP
E
I
E
R
L
-----------
R
H
S
T
T
R
S
L
L
T
R
R
D
----
V
I
V
V
----
A
S
VSAIYGLGD
P
R
E
Y
R
---------
A
R
N
L
V
V
R
E
V
L
---------
L
----
E
R
L
L
E
L
G
Y
Q
R
N
DIDLSPG
R
F
R
A
K
G
E
V
L
E
I
F
P
A
Y
E
-
T
E
P
I
---
R
V
E
L
G
F
V
L
F
P
ATHYLSPEG
L
E
E
I
L
K
E
I
E
K
---
E
L
W
E
R
V
R
Y
F
E
E
R
G
--
E
V
L
Y
A
Q
R
L
K
E
R
T
L
Y
D
L
E
M
L
R
V
MGTCPG
V
E
N
Y
---
A
R
Y
F
T
GKAPGEPPYTLLDYFPED
F
L
V
F
L
D
E
S
H
V
T
V
P
Q
L
Q
G
M
Y
R
G
D
Y
A
R
K
K
-----
T
L
V
D
---------
Y
G
F
R
L
P
S
A
L
D
N
R
P
L
R
F
E
E
F
L
E
R
V
S
Q
V
V
F
--
V
S
A
T
P
-----
G
P
F
E
L
A
H
-
S
G
R
V
V
--
E
Q
IIRPTGL
L
D
P
L
V
R
----
V
K
P
T
E
N
Q
I
L
D
--
L
M
-
E
G
I
R
-------
E
--
R
A
A
R
G
E
R
T
L
V
T
V
L
T
---
V
R
M
A
--------------
E
E
L
T
S
F
L
V
E
H
GI
R
A
R
Y
----
L
H
H
E
L
D
----
A
F
-
K
R
Q
A
---
L
I
R
D
-----------
L
R
L
GH
Y
D
----
C
-
L
V
G
I
N
L
LREGLDIPE
V
S
L
---
V
A
I
L
D
A
D
K
E
G
F
L
R
S
E
R
-
S
L
I
Q
T
I
G
R
A
--
A
R
N
A
R
G
E
V
W
L
Y
A
DRVS
E
A
----
M
Q
R
A
I
E
E
T
N
R
R
R
--------------
A
L
Q
E
A
Y
N
L
E
H
G
I
T
P
E
T
V-------------------------------------
31
Fugue
55.57
19%
-70
- C4 -
3J5P
-
TRPV1_RAT
A:
[1-564]
LYD
R
R
S
I
F
D
A
V
A
Q
SNCQELES
L
L
P
F
L
Q
R
S
KKRLTDSEFKDPETGKT
C
L
L
K
A
M
L
N
LHNGQND
T
I
A
L
L
L
D
V
A
R
K
T
DSL
K
Q
F
V
N
ASYTDSYYKGQT
A
L
H
I
A
I
E
R
RN
M
T
L
V
T
L
L
V
E
N
G
A
D
VQAAANGDFFKKTKGRP
G
F
Y
F
G
E
L
P
L
S
L
A
----
A
C
T
N
Q
L
A
I
V
K
F
L
---
L
Q
NSWQPADISARDSVGNT
V
L
H
A
L
V
E
V
A
-----
D
N
T
V
D
N
T
K
F
--
V
T
----------------------
S
M
Y
N
E
I
L
I
-
L
G
A
------
K
L
H
PTLKLEEITNR
K
G
L
T
P
L
A
L
A
A
S
S
G
K
I
G
V
L
A
Y
I
----
L
----------
Q
R
E
I
H
---------
E
P
E
C
R
H
L
S
R
K
F
T
E
W
AYGP
V
H
----
S
S
L
Y
D
L
S
C
I
D
----------
T
C
E
K
N
S
V
L
E
V
I
A
Y
S
-
S
S
E
T
---
P
N
--
R
H
D
---------------
M
L
L
V
---------
E
P
L
--
N
R
L
L
Q
--
D
K
W
D
R
F
V
K
R
I
F
Y
F
N
F
F
V
Y
C
L
Y
------
M
I
I
F
---
T
A
A
A
----------------------------
Y
Y
R
P
V
---
E
G
L
P
P
Y
K
L
K
N
-----
T
V
G
D
---------
Y
F
R
V
T
G
E
I
L
S
V
S
G
G
V
Y
F
F
F
R
G
I
Q
Y
F
L
Q
R
--
R
-
P
S
V
DS
Y
S
E
I
L
F
F
V
Q
S
-
L
F
M
L
V
--
S
V
-------
V
L
Y
F
S
Q
RKE
Y
V
A
S
M
V
F
S
L
A
M
--
G
W
-
T
N
M
L
-------
Y
--
Y
T
R
G
F
Q
Q
M
G
I
Y
A
V
M
---
I
E
K
M
--------------
I
L
R
D
L
C
R
F
----
M
F
V
Y
----
L
V
F
L
F
G
----
F
S
-
T
A
V
V
---
T
L
I
E
DG---------
K
----
Y
N
----
S
-
L
Y
S
T
C
L
---------
E
L
F
---
K
F
T
I
G
M
G
D
L
E
F
T
E
N
Y
D
F
K
-
A
V
F
I
I
L
L
--
L
A
Y
V
I
L
T
Y
I
L
------
L
L
----
N
M
L
I
A
L
M
G
E
T
V
N
--------------
K
I
A
Q
E
S
K
N
I
W
K
L
Q
R
A
I
T
I
L
D
T
E
K
S
F
LKCMRKA----------------------
34
Fugue
45.73
17%
-81
- C1 -
5CMN
1
?
E:
[3-260]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
C
P
G
----
L
L
K
G
----
V
----------
Y
Q
S
E
H
---------
L
F
E
S
D
H
Q
S
G
-------------------
A
W
C
K
D
P
----------
L
Q
A
S
D
K
I
Y
Y
M
P
W
T
P
-
Y
R
T
D
---
T
L
T
E
Y
S
S
---------------
K
D
D
F
I
A
G
---
R
P
T
T
T
Y
--
K
--
L
P
--
H
R
V
D
G
T
G
---------
F
V
V
Y
D
------
G
A
L
F
---
F
N
K
E
----------------------------
R
T
R
N
I
V
K
F
D
L
R
T
R
I
K
S
G
E
-----
A
I
I
A
NANYHDTSP
Y
R
W
G
G
K
S
-----------------
D
I
D
L
--
A
-
V
D
E
-----
N
G
L
W
V
I
Y
-
A
T
E
Q
N
--
N
G
-------
K
I
V
I
S
Q
----
L
N
P
Y
T
L
R
I
E
G
--
T
W
-
D
T
A
Y
DKRSASN
A
--
F
M
I
C
G
I
L
Y
V
V
K
S
N
K
---
I
D
Y
I
--------------
Y
N
T
D
Q
S
K
D
----
S
L
V
D
----
V
P
F
P
N
S
YQYI
A
A
-
V
D
Y
N
PRD
N
L
L
Y
-----------
V
----
W
N
NYHV
V
-
K
Y
S
L
D
F
-------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
45.69
18%
-40
- C6 -
2Z4P
1
?
A:
[1-75]
-------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
T
A
---
F
------------------
I
L
M
V
T
A
A
G
K
-----
E
R
E
V
M
E
K
L
L
--
A
M
----------------------
P
E
V
K
E
A
Y
V
-
V
Y
G
EYD
L
I
-
V
K
V
-----------
E
T
D
T
L
K
D
L
D
Q
F
I
T
----
E
K
I
R
KMPE
I
----------
Q
M
T
S
T
---------
M
I
A
I
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
45.39
27%
-108
- C3 -
4PYP
-
GTR1_HUMAN
A:
[69-138]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
A
-------
I
--
F
S
V
G
G
M
I
G
S
F
S
V
G
L
---
F
V
N
R
--------------
F
G
R
R
N
S
M
L
----
M
M
N
L
----
L
A
F
V
S
A
----
V
L
-
M
G
F
S
---
K
L
G
K
-----------
S
----
F
E
----
M
L
I
L
G
R
F
I
---------
I
G
V
---
Y
C
G
L
T
T
G
F
V
P
M
Y
V
G
E
V
-
S
-
P
T
A
L
R
G
A
--
L
G
T
L
H
Q
L
G
I
V
------
V
G
----
I
L
I
A
Q
V
F
G
L
D
S
I
--------------
M
G
N
K
D
L
W
P
L
L
L
S
I
I
F
---------------------------------------
18
HHSearch
43.99
18%
-27
- C5 -
3FTJ
-
MACB_AGGAC
A:
[408-471]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
N
Q
---
V
V
V
L
D
E
S
---------------
A
K
K
A
I
F
A
NEN
P
L
G
K
T
V
--
I
F
N
--------------
K
R
P
F
R
V
I
G
V
V
S
------
D
Q
------
S
L
N
----------------------------
L
Y
S
P
Y
S
T
V
L
N
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
Fugue
40.83
11%
-0
- C3 -
1FR3
4
?
A:
[1-67]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
I
S
G
R
---------
N
----
K
L
E
A
T
V
K
E
I
V
----------
K
G
-
T
V
M
A
K
I
V
M
D
Y
K
-
G
T
E
L
---
V
A
A
I
T
I
D
---------------
S
V
A
D
L
D
L
---
V
P
G
D
K
V
--
T
A
L
V
K
--
A
T
E
M
E
V
L
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
39.97
26%
-0
- C5 -
1OXO
2
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
K
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
15
PsiBlast_PDB
39.77
26%
-1
- C5 -
1AKA
2
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
H
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
4
PsiBlast_PDB
39.27
26%
-4
- C5 -
8AAT
2
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
K
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
11
PsiBlast_PDB
38.90
26%
3
- C5 -
1AMA
1
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
K
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
3
PsiBlast_PDB
38.90
26%
-4
- C5 -
7AAT
2
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
K
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
17
PsiBlast_PDB
38.85
26%
5
- C5 -
1AKC
1
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
H
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
5
PsiBlast_PDB
38.75
26%
-1
- C5 -
9AAT
2
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
K
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
10
PsiBlast_PDB
38.70
26%
5
- C5 -
1IVR
1
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
K
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
12
PsiBlast_PDB
38.68
26%
0
- C5 -
1MAP
1
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
K
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------
16
PsiBlast_PDB
38.62
26%
2
- C5 -
1AKB
1
AATM_CHICK
A:
[7-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
M
G
P
----------
P
---
D
P
I
L
G
V
T
E
A
F
-
K
R
D
T
NSK
K
M
N
L
G
V
G
---------------
A
Y
R
D
D
N
G
---
K
P
---
Y
--
V
L
N
C
V
--
R
K
A
E
A
M
I
A
A
K
K
M
D
K
E
Y
L
P
I
A
G
------
L
A
D
F
---
T
R
A
S
------------------------------
A
E
L
A
L
G
E
N
S
E
A
F
K
S
G
R
-----
Y
V
T
V
---------
Q
G
I
S
G
T
G
S
L
R
V
G
A
N
F
L
Q
R
F
F
K
F
S
R
D
V
Y
L
--
P
-
K
P
S
-----
W
G
N
H
T
P
I
-
F
R
D
A
G
--
L
Q
-------
L
Q
A
Y
R
Y
----
Y
D
P
K
T
C
S
L
D
F
--
T
G
-
A
M
E
D
-------
I
--
S
K
I
P
E
K
S
I
I
L
L
H
A
C
---
A
H
N
P
--------------
T
G
V
D
P
R
Q
E
----
Q
W
K
E
----
L
A
S
V
V
K
----
K
R
-
N
L
L
A
---
Y
F
D
M
-----------
A
----
Y
Q
----
G
-
F
A
S
G
D
I
---------
N
R
D
---
A
W
A
L
R
H
F
I
E
Q
G
I
D
V
V
L
-
S
-
Q
S
Y
A
H
N
M
--
G
L
Y
G
E
R
A
G
A
F
------
T
V
----
I
C
R
D
A
E
E
A
K
R
V
E
--------------
S
Q
L
K
I
L
I
R
P
M
Y
S
N
P
P
---------------------------------------