@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0519: (2015-12-02 )
MSVLVGKDTRLICQGFTGAQGTFHSEQAISYGTKMVGGVTPGKGGSSHLNLPVFNTVAEAKEKTDANATVIYVPAKFAAAAILEAIDAEIELIVCITEGIPILDMVRVKHALISSKSRLIGPNCPGIITPEECKIGIMPGHIHKRGHIGIMSRSGTLTYEAVAQTTAVGPGQSTCIGIGGDPIHGMTFVDCMELFLKDEDTHGIVVIGEIGGNEEEDVSHFVKTEKTKKPIVGFIAGQTAPPGRRMGHAGAIISSSGGSAGAKLEVMSSAGIAIAETPAMIGKKILEVMHKAHVA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_11(2NU8)
SUCD_ECOLI
[Raw transfer]




COA_A_3(4XX0)
?
[Raw transfer]




COA_A_9(1CQJ)
SUCD_ECOLI
[Raw transfer]




COA_A_11(2NU7)
SUCD_ECOLI
[Raw transfer]




COA_D_10(1CQJ)
SUCD_ECOLI
[Raw transfer]




COA_A_12(2NUA)
SUCD_ECOLI
[Raw transfer]




COA_W_23(1JLL)
SUCD_ECOLI
[Raw transfer]




COA_G_7(2SCU)
SUCD_ECOLI
[Raw transfer]




COA_D_10(1CQI)
SUCD_ECOLI
[Raw transfer]




10 PsiBlast_PDB 97.0064%-113 - C4 -4XX0 8.5 ?
9 PsiBlast_PDB 96.7564%-111 - C4 -1EUC - SUCA_PIG -
8 PsiBlast_PDB 95.1164%-109 - C4 -2FPG - SUCA_PIG -
7 PsiBlast_PDB 94.3162%-114 - C4 -2NU8 8.4 SUCD_ECOLI
27 PsiBlast_CBE 93.8262%-115 - C4 -2NU7 - SUCD_ECOLI -
23 PsiBlast_CBE 93.7062%-113 - C4 -1JKJ - SUCD_ECOLI -
1 PsiBlast_PDB 93.6762%-112 - C4 -1JKJ - SUCD_ECOLI -
6 PsiBlast_PDB 93.6362%-116 - C4 -2NU7 8.5 SUCD_ECOLI
22 PsiBlast_CBE 93.6162%-112 - C4 -1JLL 7.5 SUCD_ECOLI
28 PsiBlast_CBE 93.4562%-115 - C4 -2NU8 - SUCD_ECOLI -
5 PsiBlast_PDB 93.2962%-117 - C4 -2NUA 7.6 SUCD_ECOLI
2 PsiBlast_PDB 93.1862%-113 - C4 -1JLL - SUCD_ECOLI -
26 PsiBlast_CBE 93.0062%-116 - C4 -2NUA - SUCD_ECOLI -
24 PsiBlast_CBE 92.6263%-114 - C4 -1CQJ 7.7 SUCD_ECOLI
21 PsiBlast_CBE 92.3762%-114 - C4 -1SCU - SUCD_ECOLI -
4 PsiBlast_PDB 92.3063%-114 - C4 -1CQJ 8.0 SUCD_ECOLI
3 PsiBlast_PDB 90.7363%-113 - C4 -1CQI - SUCD_ECOLI -
25 PsiBlast_CBE 90.4563%-112 - C4 -1CQI 7.0 SUCD_ECOLI
13 PsiBlast_PDB 89.8753%-122 - C4 -1OI7 - SUCD_THETH -
12 PsiBlast_PDB 88.8454%-114 - C4 -3UFX - SUCD_THETH -
30 Fugue 58.6768%-125 - C4 -2SCU 7.8 SUCD_ECOLI