@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0366: (2015-12-14 )
MKERIVNLETLDFETSQEVSLRPNLWEDFIGQEKIKSNLQISICAAKKRQESLDHMLFFGPPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQFYSPSELSLIIKKAAAKLNQDIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLMDLSITLHALNELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEPFLLANGYLERTAKGRIATPKTHALLKIPTLNPQTLF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_5(1IN4)
RUVB_THEMA
[Raw transfer]



ADP_A_4(1IN7)
RUVB_THEMA
[Raw transfer]



ADP_A_2(1IN8)
RUVB_THEMA
[Raw transfer]



ADP_A_5(1IN4)
RUVB_THEMA
[Raw transfer]



ATP_A_5(1J7K)
RUVB_THEMA
[Raw transfer]



ADP_A_3(3PFI)
?
[Raw transfer]



ADP_A_2(1IN5)
RUVB_THEMA
[Raw transfer]



ADP_A_4(1IN6)
RUVB_THEMA
[Raw transfer]



ADP_A_3(3PFI)
?
[Raw transfer]



ANP_C_3(1IXS)
RUVB_THET8
[Raw transfer]



ANP_M_13(1IXR)
RUVB_THET8
[Raw transfer]



ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]



ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]
86 HHSearch 97.0769%-102 - C2 -3PFI 7.7 ?
1 PsiBlast_PDB 96.7367%-102 - C2 -3PFI 7.7 ?
88 HHSearch 90.5250% -96 * C2 *1IN4 9.2 RUVB_THEMA
3 PsiBlast_PDB 89.6351% -96 - C2 -1IN6 8.7 RUVB_THEMA
4 PsiBlast_PDB 89.3251% -94 - C2 -1IN5 8.2 RUVB_THEMA
5 PsiBlast_PDB 89.2751% -95 - C2 -1IN8 9.4 RUVB_THEMA
2 PsiBlast_PDB 89.1651% -94 - C2 -1IN4 9.3 RUVB_THEMA
7 PsiBlast_PDB 89.0051% -98 - C2 -1J7K 8.8 RUVB_THEMA
6 PsiBlast_PDB 88.7151% -97 - C2 -1IN7 9.3 RUVB_THEMA
8 PsiBlast_PDB 86.9550% -97 - C2 -1IXS 5.3 RUVB_THET8
107 Fugue 85.8550%-101 - C2 -1HQC 5.5 RUVB_THET8
87 HHSearch 85.8550%-101 - C2 -1HQC 5.5 RUVB_THET8
10 PsiBlast_PDB 84.6750%-101 - C2 -1HQC - RUVB_THET8 -
21 PsiBlast_CBE 83.2450% -97 - C2 -1HQC - RUVB_THET8 -
9 PsiBlast_PDB 78.5651% -87 - C2 -1IXR 4.9 RUVB_THET8
100 HHSearch 62.2619% -87 - C2 -3B9P - -
109 Fugue 61.0819% -65 - C2 -1IQP - RFCS_PYRFU -
96 HHSearch 59.0322% -82 - C2 -1IQP - RFCS_PYRFU -
94 HHSearch 58.6126% -86 - C2 -3PVS - RARA_ECOLI -
102 HHSearch 58.4118% -88 - C2 -3VFD - SPAST_HUMAN -