@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1924: (2016-03-30 )
MKGTIVIVGLGLIGGSIALAIKAKHPEAHIIGIDVSYHSLEVGKSLGVIDEIGESILIDGPKADLLIFCCPVKETEQLLMRLPGLRLKENVIVTDTGSTKGTIMEASTALRESGITFIGGHPMAGSHKSGVRAAKELLFENAYYLLTPTKDVTEDNVTDLKTWLSGTNAKFLVLSPNEHDEITGMLSHLPHIVAAALVNQTQSFTEEHPAAFRLAAGGFRDITRVASSDPRMWTDISISNKKTLTKQLTIWRDSMNQALEMLESEDATSIYAFFDGAKEFRDSLPVHQGGAIPSFYDLFVDVPDYPGVISEVTRYLGEEEISLTNIKILETREDIFGVLQITFQSDEDRDRAKRCIETRSNYTCHYE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_B_7(3GGO)
?
[Raw transfer]



NAD_B_7(3GGG)
?
[Raw transfer]



NAD_C_10(3GGP)
?
[Raw transfer]



NAD_A_5(3GGP)
?
[Raw transfer]



NAD_A_6(3GGG)
?
[Raw transfer]



NAD_D_12(3GGP)
?
[Raw transfer]



NAD_C_9(3GGG)
?
[Raw transfer]



NAD_A_5(2G5C)
?
[Raw transfer]



NAI_C_9(3GGO)
?
[Raw transfer]



NAD_B_7(3GGP)
?
[Raw transfer]



NAI_A_5(3GGO)
?
[Raw transfer]



NAI_D_10(3GGO)
?
[Raw transfer]



NAD_D_5(3GGG)
?
[Raw transfer]



NAD_A_5(2G5C)
?
[Raw transfer]



NAD_A_2(3B1F)
?
[Raw transfer]



NAD_A_2(3B1F)
?
[Raw transfer]



NAP_A_2(4WJI)
?
[Raw transfer]



ENO_C_8(3GGO)
?
[Raw transfer]



ENO_B_6(3GGO)
?
[Raw transfer]
2 PsiBlast_PDB 91.9738% -93 - C3 -3B1F 7.1 ?
34 HHSearch 90.5538% -87 - C3 -3B1F 7.1 ?
3 PsiBlast_PDB 87.0132% -98 - C3 -3GGG 9.2 ?
29 PsiBlast_CBE 86.5632% -99 - C3 -3GGG 10.6 ?
25 PsiBlast_CBE 86.3332% -94 - C3 -3GGO 10.5 ?
4 PsiBlast_PDB 86.1632% -96 - C3 -3GGO 9.8 ?
22 PsiBlast_CBE 86.0632% -96 - C3 -3GGP 10.9 ?
5 PsiBlast_PDB 86.0532% -92 - C3 -3GGP 10.0 ?
27 PsiBlast_CBE 85.5732% -93 - C3 -3GGG 10.5 ?
33 HHSearch 85.4333% -90 - C3 -2G5C 10.6 ?
24 PsiBlast_CBE 85.2932% -99 - C3 -3GGO 10.1 ?
23 PsiBlast_CBE 85.2732% -94 - C3 -3GGP 10.7 ?
21 PsiBlast_CBE 85.2632% -92 - C3 -3GGP 8.9 ?
28 PsiBlast_CBE 84.3432% -95 - C3 -3GGG 10.5 ?
6 PsiBlast_PDB 84.3033% -98 - C3 -2G5C 10.6 ?
26 PsiBlast_CBE 84.1432% -91 - C3 -3GGO 10.0 ?
35 HHSearch 77.3925% -63 - C3 -3KTD - ? -
1 PsiBlast_PDB 75.7040% -31 - C3 -3DZB - ? -
7 PsiBlast_PDB 72.2329% -53 - C3 -4WJI 7.5 ?
57 Fugue 63.3217% -71 - C3 -2PV7 - TYRA_HAEIN -