@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu30810: (2016-07-20 )
MGTVNITVSDGVRYAVADEGPNASEAVVCLHGFTGSKQSWTFLDEMLPDSRLIKIDCLGHGETDAPLNGKRYSTTRQVSDLAEIFDQLKLHKVKLIGYSMGGRLAYSFAMTYPERVSALVLESTTPGLKTLGERRERIMRDRKLADFILRDGLEAFVAYWENIPLFSSQQRLAEDIRYRIRSGRLRNNKIGLANSLTGMGTGSQPSLWSRVEEIDVPVLLICGEWDEKFCAINQEVHKMLPSSRIEIVPKAGHTVHVEQPRLFGKIVSEFLTSI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_9(4GEG)
MENH_ECOLI
[Raw transfer]



GOL_A_6(4MXD)
MENH_ECOLI
[Raw transfer]
112 HHSearch 81.4434% -3 - C- -2XMZ - ? -
1 PsiBlast_PDB 79.0734% -7 - C- -2XMZ - ? -
102 Fugue 74.0827%-113 - C1 -4MYD - MENH_ECOLI -
111 HHSearch 65.6824% -34 - C1 -3OM8 - ? -
15 PsiBlast_PDB 56.8024% 0 - C- -4NS4 - ? -
2 PsiBlast_PDB 56.0228% -43 - C1 -4MXD 3.0 MENH_ECOLI
4 PsiBlast_PDB 55.5528% -36 - C1 -4MYS - MENH_ECOLI -
14 PsiBlast_PDB 55.2126% -6 - C1 -3OM8 - ? -
19 PsiBlast_PDB 53.8627% -4 - C1 -4UHC - ? -
121 HHSearch 53.7022% -37 - C1 -4CCY - YBFK_BACSU -
20 PsiBlast_PDB 53.5427% -2 - C1 -4UHD - ? -
3 PsiBlast_PDB 53.4528% -36 - C1 -4MYD - MENH_ECOLI -
5 PsiBlast_PDB 53.1828% -34 - C1 -4GDM - MENH_ECOLI -
6 PsiBlast_PDB 53.1428% -33 - C1 -4GEG 2.3 MENH_ECOLI
7 PsiBlast_PDB 52.2328% -32 - C1 -4GEC - MENH_ECOLI -
116 HHSearch 51.1620% -42 - C1 -4CCW - ? -
119 HHSearch 50.9920% -10 - C1 -4PW0 - ? -
124 HHSearch 50.9521% -1 - C1 -2XUA - ? -
122 HHSearch 49.1821% -11 - C1 -3G9X - DHAA_RHOSO -
114 HHSearch 48.3319% -1 - C1 -4INZ - ? -