@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34640: (2016-07-28 )
MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQMQNYSYPILEKKWTEI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TAR_A_7(5AJT)
?
[Raw transfer]



TAR_A_7(5AJT)
?
[Raw transfer]



TAR_C_11(5AJT)
?
[Raw transfer]



RP5_A_2(5AJU)
?
[Raw transfer]



SRT_D_13(5AJT)
?
[Raw transfer]



TAR_B_9(5AJT)
?
[Raw transfer]



EDO_A_5(2Q4D)
LOG8_ARATH
[Raw transfer]



EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]



EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]



UNL_A_3(3QUA)
?
[Raw transfer]



UNL_B_4(3QUA)
?
[Raw transfer]



UNL_A_3(3QUA)
?
[Raw transfer]
46 HHSearch 95.81100%-120 - C3 -1T35 - YVDD_BACSU -
1 PsiBlast_PDB 93.9094%-118 - C3 -1T35 - YVDD_BACSU -
49 HHSearch 71.2231%-132 * C3 *3QUA 2.8 ?
50 HHSearch 68.2639% -51 - C3 -2A33 - LOG3_ARATH -
2 PsiBlast_PDB 67.5540%-149 - C3 -1YDH 3.2 LOG8_ARATH
3 PsiBlast_PDB 66.4940%-139 - C3 -2Q4D 3.5 LOG8_ARATH
6 PsiBlast_PDB 66.2133%-124 - C3 -3QUA 2.8 ?
24 PsiBlast_CBE 66.1333%-129 - C3 -3QUA 2.8 ?
47 HHSearch 65.9539% -37 - C3 -1YDH 3.2 LOG8_ARATH
45 HHSearch 65.4436% -33 - C3 -5AJT 4.2 ?
23 PsiBlast_CBE 63.5435% -40 - C3 -5AJT 2.3 ?
22 PsiBlast_CBE 63.3735% -38 - C3 -5AJT 2.5 ?
4 PsiBlast_PDB 63.2935% -36 - C3 -5AJT 4.2 ?
21 PsiBlast_CBE 63.1835% -36 - C3 -5AJT 3.5 ?
54 HHSearch 62.2226% -72 - C3 -1WEK - ? -
5 PsiBlast_PDB 61.8135% -37 - C3 -5AJU 2.6 ?
48 HHSearch 60.0927% -73 - C3 -3SBX - LOGH_MYCMM -
56 HHSearch 54.1223%-115 - C- -2IZ6 - ? -
51 HHSearch 53.5421% -33 - C3 -3BQ9 - ? -
26 PsiBlast_CBE 53.2831%-127 - C3 -3SBX - LOGH_MYCMM -