@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF02146_HST2_Y: (2014-09-28 )
MSVSTASTEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKILTAQGGMGDNSKEQLLEIVHDLENLSLDQSEHESADKKDKKLQRLNGHDSDEDGASNSSSSQKAAKE

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OAD_A_4(1Q1A)
HST2_YEAST
[Raw transfer]




CNA_A_4(2OD2)
HST2_YEAST
[Raw transfer]




APR_B_12(1Q17)
HST2_YEAST
[Raw transfer]




APR_A_5(1SZD)
HST2_YEAST
[Raw transfer]




APR_A_11(1Q17)
HST2_YEAST
[Raw transfer]




XYQ_A_5(2HJH)
SIR2_YEAST
[Raw transfer]




APR_C_13(1Q17)
HST2_YEAST
[Raw transfer]




APR_A_6(4IAO)
SIR2_YEAST
[Raw transfer]




A1R_A_4(2QQG)
HST2_YEAST
[Raw transfer]




A1R_A_4(2QQF)
HST2_YEAST
[Raw transfer]




CNA_A_5(1SZC)
HST2_YEAST
[Raw transfer]




A1R_A_4(2OD9)
HST2_YEAST
[Raw transfer]




A1R_A_4(2OD7)
HST2_YEAST
[Raw transfer]




AR6_A_3(4BVB)
SIR3_HUMAN
[Raw transfer]




OAD_A_5(4BVH)
SIR3_HUMAN
[Raw transfer]




NAD_A_2(4BV3)
SIR3_HUMAN
[Raw transfer]




OAD_B_17(4BVG)
SIR3_HUMAN
[Raw transfer]




GOL_A_6(1SZC)
HST2_YEAST
[Raw transfer]




GOL_A_5(2OD2)
HST2_YEAST
[Raw transfer]




GOL_A_6(1SZD)
HST2_YEAST
[Raw transfer]




GOL_A_7(4BV3)
SIR3_HUMAN
[Raw transfer]




GOL_A_4(3U31)
SIR5_PLAF7
[Raw transfer]




GOL_A_8(4BVG)
SIR3_HUMAN
[Raw transfer]




GOL_A_6(4C7B)
SIR3_HUMAN
[Raw transfer]




BVB_A_4(4C7B)
SIR3_HUMAN
[Raw transfer]




CHAIN_B_2(1YC5)
NPD_THEMA
[Raw transfer]

-

OCZ_A_4(4BVH)
SIR3_HUMAN
[Raw transfer]




OCZ_A_4(4BV3)
SIR3_HUMAN
[Raw transfer]




OCZ_A_2(4BVB)
SIR3_HUMAN
[Raw transfer]




NCA_A_4(1YC5)
NPD_THEMA
[Raw transfer]




NCA_A_5(2QQG)
HST2_YEAST
[Raw transfer]




CHAIN_B_2(2OD2)
HST2_YEAST
[Raw transfer]

-

NCA_A_5(2OD9)
HST2_YEAST
[Raw transfer]




CHAIN_B_2(2OD7)
HST2_YEAST
[Raw transfer]

-

CHAIN_B_2(1SZD)
HST2_YEAST
[Raw transfer]

-

CHAIN_B_2(1SZC)
HST2_YEAST
[Raw transfer]

-

CHAIN_B_2(2QQF)
HST2_YEAST
[Raw transfer]

-

CHAIN_B_2(2OD9)
HST2_YEAST
[Raw transfer]

-

CHAIN_B_2(2QQG)
HST2_YEAST
[Raw transfer]

-

EDO_A_7(3ZGO)
SIR2_HUMAN
[Raw transfer]




CHAIN_B_2(1Q1A)
HST2_YEAST
[Raw transfer]

-

PEG_A_15(4BVG)
SIR3_HUMAN
[Raw transfer]




NCA_A_6(2HJH)
SIR2_YEAST
[Raw transfer]




PGE_A_6(3ZGO)
SIR2_HUMAN
[Raw transfer]




PIT_A_4(4HD8)
SIR3_HUMAN
[Raw transfer]




CHAIN_B_2(4BVF)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_C_2(4C78)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(4FZ3)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_F_2(4HD8)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(4C7B)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(4BVG)
SIR3_HUMAN
[Raw transfer]

-

CHAIN_B_2(4BVE)
SIR3_HUMAN
[Raw transfer]

-

5 PsiBlast_PDB 96.67100%-117 - C3 -2OD7 8.0 HST2_YEAST
8 PsiBlast_PDB 96.00100%-112 - C3 -2QQG 8.7 HST2_YEAST
6 PsiBlast_PDB 96.00100%-112 - C3 -2OD9 8.7 HST2_YEAST
3 PsiBlast_PDB 95.98100%-111 - C3 -1SZD 9.2 HST2_YEAST
10 PsiBlast_PDB 95.92100%-118 - C3 -1Q1A 12.5 HST2_YEAST
4 PsiBlast_PDB 95.89100%-114 - C3 -1Q17 12.1 HST2_YEAST
2 PsiBlast_PDB 95.49100%-112 - C3 -1SZC 11.0 HST2_YEAST
21 PsiBlast_CBE 95.42100%-117 - C3 -1Q17 11.6 HST2_YEAST
9 PsiBlast_PDB 95.4199%-114 - C3 -2OD2 10.8 HST2_YEAST
22 PsiBlast_CBE 95.27100%-109 - C3 -1Q17 11.5 HST2_YEAST
7 PsiBlast_PDB 95.20100%-115 - C3 -2QQF 8.8 HST2_YEAST
33 HHSearch 79.7044% -99 - C3 -3ZGO 2.9 SIR2_HUMAN
13 PsiBlast_PDB 74.3141% -99 - C3 -4BVB 10.0 SIR3_HUMAN
14 PsiBlast_PDB 74.2841%-102 - C3 -4BVE 13.3 SIR3_HUMAN
17 PsiBlast_PDB 73.9841% -92 - C3 -4BVH 11.0 SIR3_HUMAN
15 PsiBlast_PDB 73.3941% -95 - C3 -4BVF 12.0 SIR3_HUMAN
16 PsiBlast_PDB 73.2141% -95 - C3 -4BVG 11.6 SIR3_HUMAN
19 PsiBlast_PDB 71.9241% -95 - C3 -4C7B 7.1 SIR3_HUMAN
12 PsiBlast_PDB 71.8941% -97 - C3 -4BV3 9.2 SIR3_HUMAN
11 PsiBlast_PDB 71.7341% -97 - C3 -4HD8 6.7 SIR3_HUMAN
18 PsiBlast_PDB 71.3041% -96 - C3 -4C78 7.2 SIR3_HUMAN
20 PsiBlast_PDB 70.5642% -97 - C3 -4FZ3 6.9 SIR3_HUMAN
38 HHSearch 70.2033%-105 - C3 -4IAO 10.4 SIR2_YEAST
37 HHSearch 69.2533%-104 - C3 -2HJH 11.6 SIR2_YEAST
40 HHSearch 63.5236%-100 - C3 -1YC5 7.2 NPD_THEMA