@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : HCAR3_HUMAN: (2016-01-10 )
MNRHHLQDHFLEIDKKNCCVFRDDFIAKVLPPVLGLEFIFGLLGNGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFVMDYYVRRSDWKFGDIPCRLVLFMFAMNRQGSIIFLTVVAVDRYFRVVHPHHALNKISNWTAAIISCLLWGITVGLTVHLLKKKLLIQNGTANVCISFSICHTFRWHEAMFLLEFFLPLGIILFCSARIIWSLRQRQMDRHAKIKRAITFIMVVAIVFVICFLPSVVVRIHIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSFPNFFSTLINRCLQRKITGEPDNNRSTSVELTGDPNKTRGAPEALIANSGEPWSPSYLGPTSNNHSKKGHCHQEPASLEKQLGCCIE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_7(4RWD)
C562_ECOLX
[Raw transfer]
41 Fugue 95.6231%-166 * C1 *4XNV - P2RY1_HUMAN (first) -
32 HHSearch 90.9123%-160 - C1 -3PBL - DRD3_HUMAN (first) -
2 PsiBlast_PDB 90.2825%-161 - C1 -4XNW - RUBR_CLOPA -
1 PsiBlast_PDB 90.2025%-167 - C1 -4XNV - P2RY1_HUMAN (first) -
26 HHSearch 85.5920%-159 - C1 -3RZE - ENLYS_BPT4 (first) -
21 HHSearch 85.4322%-158 - C1 -3ODU - CXCR4_HUMAN (first) -
5 PsiBlast_PDB 85.0929%-156 - C1 -4RWA - C562_ECOLX (first) -
6 PsiBlast_PDB 84.4329%-158 - C1 -4RWD 3.9 C562_ECOLX (first)
13 PsiBlast_PDB 83.2420%-158 - C1 -4MBS - CCR5_HUMAN (first) -
43 Fugue 83.2319%-140 - C1 -1F88 - OPSD_BOVIN -
24 HHSearch 82.9123%-155 - C1 -2Z73 - OPSD_TODPA -
3 PsiBlast_PDB 82.8530%-165 - C1 -5C1M - ? -
4 PsiBlast_PDB 82.7929%-161 - C1 -4N6H - OPRD_HUMAN -
25 HHSearch 82.6821%-155 - C1 -2RH1 - ADRB2_HUMAN (first) -
20 PsiBlast_PDB 81.0124%-155 - C1 -3DQB - GNAT1_BOVIN (first) -
10 PsiBlast_PDB 80.9325%-170 - C1 -4XT1 - US28_HCMVA -
19 PsiBlast_PDB 80.2424% -91 - C- -3C9L - OPSD_BOVIN -
18 PsiBlast_PDB 79.8324%-162 - C1 -3CAP - OPSD_BOVIN -
11 PsiBlast_PDB 79.2225%-162 - C1 -4XT3 - US28_HCMVA -
23 HHSearch 78.7619%-150 - C1 -3UON - ACM2_HUMAN (first) -