@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
ALSCGTVSGYVAPCIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
30 SP3 95.0253%-136 - C2 -1FK5 4.3 NLTP_MAIZE
13 HHSearch 91.4154%-125 - C2 -1T12 - NLTP1_TOBAC -
11 HHSearch 89.9954%-135 - C2 -2ALG 3.8 NLTP1_PRUPE
15 HHSearch 89.1153%-133 - C2 -1SIY - NLTP1_VIGRR -
12 HHSearch 89.0953%-126 - C2 -1AFH - NLTP_MAIZE -
16 HHSearch 84.6043%-135 - C2 -1BWO 6.5 NLTP1_WHEAT
22 HHSearch 60.0125%-162 - C2 -1BEA - ITRF_MAIZE -
28 HHSearch 59.1920%-158 * C2 *1HSS - IAA1_WHEAT -
34 SP3 56.9617%-144 - C2 -1HSS - IAA1_WHEAT -
24 HHSearch 55.0024%-141 - C2 -1SM7 - ? -
26 HHSearch 52.6326%-106 - C2 -1PSY - 2SS_RICCO -
17 HHSearch 52.0623%-115 - C2 -2RKN - DIRL1_ARATH -
7 Fugue 50.5920% -74 - C2 -1PSY - 2SS_RICCO -
2 Fugue 48.2621% -89 - C2 -2RKN - DIRL1_ARATH -
21 HHSearch 48.0916%-143 - C2 -1B1U - IAAT_ELECO -
5 Fugue 46.5718% -89 - C2 -1L6W - FSAA_ECOLI -
29 HHSearch 45.5218%-112 - C2 -2LVF - ? -
3 Fugue 43.8023% -95 - C2 -1L6H - NLTPX_ORYSJ -
37 SP3 43.2217% -96 - C2 -1QPO - NADC_MYCTU -
33 SP3 42.7017% -99 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 97.88100%-150 - C- -M039 - -
40 96.66100%-148 - C- -M040 - -
45 96.11100%-148 - C- -M045 - -
43 93.60100%-152 - C- -M043 - -