@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
LTCGQVQSRMTPCLPYLTGSGPLGRCCGGVKGLLGAAKTPADRKTVCSCLKSAAGSIGGINVRKAAGLPNMCGVNIPYQISPSTDCTKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 96.3569%-136 - C3 -1T12 - NLTP1_TOBAC -
14 HHSearch 87.4351%-128 - C3 -1SIY - NLTP1_VIGRR -
13 HHSearch 82.3547%-136 - C3 -2ALG 2.8 NLTP1_PRUPE
12 HHSearch 81.4651%-123 - C3 -1AFH - NLTP_MAIZE -
32 SP3 81.4351%-131 - C3 -1FK5 5.6 NLTP_MAIZE
16 HHSearch 80.4245%-130 - C3 -1BWO 4.2 NLTP1_WHEAT
23 HHSearch 60.8629%-132 - C3 -1SM7 - ? -
31 HHSearch 56.7225%-156 * C3 *1HSS - IAA1_WHEAT -
24 HHSearch 53.5524%-153 - C3 -1BEA - ITRF_MAIZE -
26 HHSearch 50.2824% -95 - C3 -1PSY - 2SS_RICCO -
29 HHSearch 47.8418%-113 - C3 -1W2Q - CONG_ARAHY -
17 HHSearch 47.7728%-104 - C3 -2RKN - DIRL1_ARATH -
27 HHSearch 47.5322%-123 - C3 -1S6D - 2SS8_HELAN -
22 HHSearch 46.5717%-137 - C3 -1B1U - IAAT_ELECO -
2 Fugue 46.2926% -91 - C3 -2RKN - DIRL1_ARATH -
25 HHSearch 46.1125%-109 - C3 -3OB4 - ? -
7 Fugue 45.0920% -87 - C3 -1S6D - 2SS8_HELAN -
3 Fugue 41.9422%-109 - C3 -1L6H - NLTPX_ORYSJ -
19 HHSearch 39.5023% -74 - C3 -1N89 - NLT2G_WHEAT -
6 Fugue 37.8714% -69 - C3 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 95.30100%-141 - C- -M039 - -
36 94.65100%-134 - C- -M036 - -
42 92.36100%-135 - C- -M042 - -
38 91.46100%-142 - C- -M038 - -