@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AIGCGTVVSYLNSCFPYVTGTGALGGCCKGIKDLYAAAQTTADRQSVCDCLKDLAASTTGVDLGKAAGLPSQCGLNIPYKIIPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
21 HHSearch 95.3462%-155 - C2 -1T12 - NLTP1_TOBAC -
23 HHSearch 91.4952%-154 - C2 -2ALG 3.9 NLTP1_PRUPE
11 SP3 86.2850%-139 - C2 -1FK5 5.8 NLTP_MAIZE
26 HHSearch 85.5642%-153 - C2 -1BWO - NLTP1_WHEAT -
25 HHSearch 84.3640%-146 - C2 -1SIY - NLTP1_VIGRR -
22 HHSearch 83.4851%-141 - C2 -1AFH - NLTP_MAIZE -
33 HHSearch 63.2532%-156 - C2 -1BEA - ITRF_MAIZE -
4 Fugue 56.6125%-121 - C2 -1S6D - 2SS8_HELAN -
27 HHSearch 56.2230%-102 - C2 -2RKN - DIRL1_ARATH -
34 HHSearch 54.9226%-127 - C2 -1SM7 - ? -
38 HHSearch 54.0525%-138 - C2 -1S6D - 2SS8_HELAN -
2 Fugue 53.2331% -92 - C2 -2RKN - DIRL1_ARATH -
35 HHSearch 52.5426%-122 - C2 -3OB4 - ? -
32 HHSearch 51.1422%-137 - C2 -1B1U - IAAT_ELECO -
36 HHSearch 50.0224% -80 - C2 -1PSY - 2SS_RICCO -
6 Fugue 48.6823% -77 - C2 -1PSY - 2SS_RICCO -
10 Fugue 47.2420%-112 - C2 -1HSS - IAA1_WHEAT -
9 Fugue 44.5620%-122 - C2 -1L6H - NLTPX_ORYSJ -
5 Fugue 42.7120% -79 - C2 -1W2Q - CONG_ARAHY -
15 SP3 41.0015%-108 - C2 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
39 99.81100%-155 - C- -M039 - -
43 95.03100%-163 - C- -M043 - -
46 94.36100%-163 - C- -M046 - -