@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-10 )
AVTCSSVTKQLTPCLSYLTSGGAPTAACCGGVKSLNGMASMSTPDRQATCNCLKAASKGINLQNAVSLPAKCGVKIGYSISPNTDCSKVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
21 HHSearch 90.7558%-114 - C4 -1T12 - NLTP1_TOBAC -
25 HHSearch 87.0748%-101 - C4 -1BWO 6.4 NLTP1_WHEAT
22 HHSearch 86.0553%-101 - C4 -1AFH - NLTP_MAIZE -
24 HHSearch 85.5045%-105 - C4 -1SIY - NLTP1_VIGRR -
20 HHSearch 84.2751%-104 - C4 -2ALG 3.6 NLTP1_PRUPE
11 SP3 84.2152% -93 - C4 -1FK5 5.6 NLTP_MAIZE
32 HHSearch 68.5528% -98 - C4 -1SM7 - ? -
7 Fugue 65.2422%-100 - C4 -1S6D - 2SS8_HELAN -
36 HHSearch 64.6219% -97 - C4 -1W2Q - CONG_ARAHY -
31 HHSearch 63.1316%-113 - C4 -1B1U - IAAT_ELECO -
34 HHSearch 63.0623%-115 - C4 -1BEA - ITRF_MAIZE -
35 HHSearch 59.9126% -83 - C4 -1PSY - 2SS_RICCO -
38 HHSearch 58.1419% -83 - C4 -2LVF - ? -
9 Fugue 57.1220%-105 - C4 -1HSS - IAA1_WHEAT -
2 Fugue 56.0523% -77 - C4 -2RKN - DIRL1_ARATH -
5 Fugue 52.3122% -28 - C4 -1PSY - 2SS_RICCO -
3 Fugue 51.8232% -63 - C4 -1L6H - NLTPX_ORYSJ -
26 HHSearch 51.6721% -88 - C4 -2RKN - DIRL1_ARATH -
10 Fugue 48.1115% -66 - C4 -3Q87 - ? -
27 HHSearch 46.9135% -82 - C4 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 96.59100%-113 - C- -M042 - -
43 91.96100%-105 - C- -M043 - -
40 32.47100% 18 - C- -M040 - -