@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
DLSCGQVLSTLYPCLGYIRNPGASVPAPCCNGIRIVNDEAKNTSDRQSVCRCLKSTIVLPGINLDALANLPTNCGVNLPYKITPDIDCNKIPY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
11 SP3 91.7839%-145 - C2 -1FK5 - NLTP_MAIZE -
25 HHSearch 91.4840%-164 - C2 -1SIY - NLTP1_VIGRR -
23 HHSearch 91.4150%-148 - C2 -1T12 - NLTP1_TOBAC -
24 HHSearch 91.2547%-147 - C2 -2ALG 3.0 NLTP1_PRUPE
21 HHSearch 88.7840%-144 - C2 -1AFH - NLTP_MAIZE -
26 HHSearch 87.5739%-156 - C2 -1BWO - NLTP1_WHEAT -
35 HHSearch 66.3429%-169 - C2 -1SM7 - ? -
34 HHSearch 56.7819%-182 - C2 -1BEA - ITRF_MAIZE -
27 HHSearch 54.8022%-125 - C2 -2RKN - DIRL1_ARATH -
40 HHSearch 54.3021%-165 - C2 -1HSS - IAA1_WHEAT -
2 Fugue 54.2122%-129 - C2 -2RKN - DIRL1_ARATH -
5 Fugue 51.3018%-130 - C2 -1S6D - 2SS8_HELAN -
36 HHSearch 48.8323%-106 - C2 -1PSY - 2SS_RICCO -
39 HHSearch 48.7018%-121 - C2 -1W2Q - CONG_ARAHY -
38 HHSearch 48.6021%-118 - C2 -2LVF - ? -
8 Fugue 47.7626% -92 - C2 -1L6H - NLTPX_ORYSJ -
13 SP3 45.7120%-116 - C2 -1L6H - NLTPX_ORYSJ -
37 HHSearch 45.5216%-140 - C2 -1S6D - 2SS8_HELAN -
33 HHSearch 45.2729%-108 - C2 -3OB4 - ? -
32 HHSearch 44.7817%-121 - C2 -1B1U - IAAT_ELECO -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
46 96.84100%-174 - C- -M046 - -
48 95.12100%-162 - C- -M048 - -