@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0112: (2016-03-12 )
MIEKSQACHDSLLDSVGQTPMVQLHQLFPKHEVFAKLEYMNPGGSMKDRPAKYIIEHGIKHGLITENTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKISPTNLKIIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAYWINQYANELNWQSHYHGAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIKEGHPNAQIVAVDAKGSVIFGDKPINRELPGIGASRVPEILNRSEINQVIHVDDYQSALGCRKLIDYEGIFAGGSTGSIIAAIEQLITSIEEGATIVTILPDRGDRYLDLVYSDTWLEKMKSRQGVKSE

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P1T_A_3(3PC3)
?
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




PDA_A_2(2Q3D)
CYSK_MYCTU
[Raw transfer]




OAS_X_3(4ZU6)
CYSK_HAEIN
[Raw transfer]




CYS_A_2(4LMB)
?
[Raw transfer]




4AT_A_4(2EFY)
?
[Raw transfer]




FGA_B_11(4AIR)
?
[Raw transfer]




P1T_X_3(5DBH)
?
[Raw transfer]




PLP_X_4(4ZU6)
CYSK_HAEIN
[Raw transfer]




PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]




PLP_A_3(4L0D)
CBS_HUMAN
[Raw transfer]




PLP_B_8(2BHS)
CYSM_ECOLI
[Raw transfer]




PLP_C_9(2BHS)
CYSM_ECOLI
[Raw transfer]




PLP_A_7(2BHS)
CYSM_ECOLI
[Raw transfer]




PLP_B_5(4L0D)
CBS_HUMAN
[Raw transfer]




PLP_D_11(2BHS)
CYSM_ECOLI
[Raw transfer]




PLP_A_3(1VE1)
?
[Raw transfer]




PLP_B_7(4LMA)
?
[Raw transfer]




PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]




PLP_B_5(3DWG)
CYSM_MYCTU
[Raw transfer]




PLP_B_18(4COO)
CBS_HUMAN
[Raw transfer]




PLP_D_4(1D6S)
CYSK_SALTY
[Raw transfer]




PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]




PLP_E_5(1D6S)
CYSK_SALTY
[Raw transfer]




PLP_A_2(2ECO)
?
[Raw transfer]




PLP_A_5(4LMA)
?
[Raw transfer]




PLP_A_7(2ISQ)
CYSK1_ARATH
[Raw transfer]




PLP_A_3(2EFY)
?
[Raw transfer]




PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_B_5(2EFY)
?
[Raw transfer]




PLP_A_2(2ECQ)
?
[Raw transfer]




PLP_A_4(3DWG)
CYSM_MYCTU
[Raw transfer]




PLP_A_4(3DWG)
CYSM_MYCTU
[Raw transfer]




PLP_A_4(4LMB)
?
[Raw transfer]




PLP_B_5(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_A_3(1VE1)
?
[Raw transfer]




PLP_A_2(3ZEI)
CYSK_MYCTU
[Raw transfer]




PLP_B_7(4PCU)
CBS_HUMAN
[Raw transfer]




PLP_A_4(4PCU)
CBS_HUMAN
[Raw transfer]




MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]




PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_B_4(1OAS)
CYSK_SALTY
[Raw transfer]




3HL_A_3(2ECQ)
?
[Raw transfer]




PLP_C_14(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_D_16(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_B_15(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_A_13(1FCJ)
CYSK_SALTY
[Raw transfer]




MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]




FGA_B_9(4AIR)
?
[Raw transfer]




93 HHSearch 88.9634% -75 - C2 -3DWG 3.6 CYSM_MYCTU
95 HHSearch 88.8331% -72 - C2 -3PC3 8.2 ?
89 HHSearch 87.7933% -80 - C2 -1Z7W 3.6 CYSK1_ARATH
107 Fugue 87.5331% -69 - C2 -3PC3 8.2 ?
68 PsiBlast_CBE 87.4935% -82 - C2 -1Z7W 3.6 CYSK1_ARATH
12 PsiBlast_PDB 87.4737% -83 - C2 -4LMA 3.3 ?
45 PsiBlast_CBE 87.1537% -81 - C2 -4LMA 3.8 ?
71 PsiBlast_CBE 87.0634% -80 - C2 -1Z7Y - CYSK1_ARATH -
8 PsiBlast_PDB 86.6234% -76 - C2 -4R2V - CYSM_HELPY -
69 PsiBlast_CBE 86.6135% -82 - C2 -2ISQ 4.2 CYSK1_ARATH
4 PsiBlast_PDB 86.6031% -81 - C2 -4L0D 4.0 CBS_HUMAN
27 PsiBlast_CBE 86.3231% -80 - C2 -4COO 4.4 CBS_HUMAN
7 PsiBlast_PDB 86.0731% -80 - C2 -4L27 - CBS_HUMAN -
62 PsiBlast_CBE 86.0335% -76 - C2 -4LMB 4.3 ?
28 PsiBlast_CBE 86.0031% -81 - C2 -4L0D 3.8 CBS_HUMAN
82 PsiBlast_CBE 85.9333% -79 - C2 -3SPX - ? -
5 PsiBlast_PDB 85.9331% -83 - C2 -4L3V - CBS_HUMAN -
39 PsiBlast_CBE 85.9132% -89 - C2 -1JBQ - CBS_HUMAN -
41 PsiBlast_CBE 85.9032% -88 - C2 -1JBQ - CBS_HUMAN -
9 PsiBlast_PDB 85.8332% -89 - C2 -1JBQ - CBS_HUMAN -
26 PsiBlast_CBE 85.7931% -85 - C2 -4PCU 2.7 CBS_HUMAN
3 PsiBlast_PDB 85.7731% -79 - C2 -4COO 4.3 CBS_HUMAN
2 PsiBlast_PDB 85.0831% -84 - C2 -4PCU 3.1 CBS_HUMAN
66 PsiBlast_CBE 84.5331% -79 - C2 -4AEC 3.7 CYSKM_ARATH
19 PsiBlast_PDB 84.3233% -82 - C2 -2EFY 3.7 ?
16 PsiBlast_PDB 84.3233% -83 - C2 -1VE1 3.3 ?
47 PsiBlast_CBE 84.0133% -82 - C2 -2EFY 3.6 ?
75 PsiBlast_CBE 83.8632% -81 - C2 -1OAS 3.8 CYSK_SALTY
108 Fugue 83.8231% -76 - C2 -1OAS 3.8 CYSK_SALTY
100 HHSearch 83.5332% -75 * C2 *1VE1 3.3 ?
17 PsiBlast_PDB 83.5233% -84 - C2 -2ECO 3.9 ?
18 PsiBlast_PDB 83.4933% -82 - C2 -2ECQ 3.4 ?
73 PsiBlast_CBE 83.3933% -72 - C2 -2Q3B 2.7 CYSK_MYCTU
83 PsiBlast_CBE 83.2531% -73 - C2 -1D6S 4.0 CYSK_SALTY
91 HHSearch 83.1232% -73 - C2 -2Q3B 2.7 CYSK_MYCTU
59 PsiBlast_CBE 83.1133% -91 - C2 -3DWG 3.8 CYSM_MYCTU
64 PsiBlast_CBE 83.0033% -73 - C2 -3ZEI 3.8 CYSK_MYCTU
60 PsiBlast_CBE 82.9033% -82 - C2 -3DWG 3.6 CYSM_MYCTU
74 PsiBlast_CBE 82.8732% -81 - C2 -1OAS 4.0 CYSK_SALTY
67 PsiBlast_CBE 82.4931% -75 - C2 -4AEC 4.1 CYSKM_ARATH
63 PsiBlast_CBE 82.1733% -69 - C2 -2Q3D 6.4 CYSK_MYCTU
84 PsiBlast_CBE 81.5431% -73 - C2 -1D6S 4.3 CYSK_SALTY
70 PsiBlast_CBE 81.0633% -89 - C2 -4AIR 3.3 ?
85 PsiBlast_CBE 80.5233% -78 - C2 -5DBH 7.1 ?
78 PsiBlast_CBE 80.0932% -77 - C2 -1FCJ 3.9 CYSK_SALTY
55 PsiBlast_CBE 79.0235% -79 - C2 -2BHS 3.3 CYSM_ECOLI
77 PsiBlast_CBE 78.9932% -76 - C2 -1FCJ 3.7 CYSK_SALTY
58 PsiBlast_CBE 78.9435% -78 - C2 -2BHS 4.1 CYSM_ECOLI
57 PsiBlast_CBE 78.6735% -78 - C2 -2BHS 4.1 CYSM_ECOLI
76 PsiBlast_CBE 78.4232% -78 - C2 -1FCJ 4.5 CYSK_SALTY
56 PsiBlast_CBE 78.3535% -79 - C2 -2BHS 4.5 CYSM_ECOLI
79 PsiBlast_CBE 78.1932% -77 - C2 -1FCJ 4.1 CYSK_SALTY
86 PsiBlast_CBE 48.3733% 2 - C2 -4ZU6 3.1 CYSK_HAEIN